Top 10 genes with highest correlation to Rv1967/mce3B:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2701c/suhB | (cc=0.5529) | info on Rv2701c/suhB |
| Rv0569/- | (cc=0.5332) | info on Rv0569/- |
| Rv1046c/- | (cc=0.513) | info on Rv1046c/- |
| Rv3401/- | (cc=0.5067) | info on Rv3401/- |
| Rv3408/vapC47 | (cc=0.4672) | info on Rv3408/vapC47 |
| Rv3055/- | (cc=0.4648) | info on Rv3055/- |
| Rv2741/PE_PGRS47 | (cc=0.4623) | info on Rv2741/PE_PGRS47 |
| Rv1953/vapC14 | (cc=0.4494) | info on Rv1953/vapC14 |
| Rv2424c/- | (cc=0.447) | info on Rv2424c/- |
| Rv3354/- | (cc=0.4441) | info on Rv3354/- |
Correlation of Rv1967/mce3B with Rv3055/-
Normalized LFCs for Rv1967/mce3B:
(description and provenance of datasets)
| Rv1967/mce3B | Rv3055/- | |
| Fe_supp_jason_reseq | -0.505 | -0.038 |
| low_pH_jason_reseq | -0.509 | -1.819 |
| NO_jason_reseq | 0.058 | -1.748 |
| B6_jason_reseq | 0.161 | -0.069 |
| MHCII_jason_reseq | 0.099 | -0.203 |
| Isoniazid02 | -0.07 | 0.0 |
| Rifampicin4 | 0.696 | 0.306 |
| Ethambutol3 | 0.264 | 0.95 |
| Meropenem3 | 1.169 | 1.065 |
| Vancomycin16 | 0.371 | 0.554 |
| Rv2680_day32 | 1.001 | 0.761 |
| H37Rv_KO_MarP | 0.008 | 0.354 |
| hypoxia_3wks | -0.024 | -0.347 |
| hypoxia_6wks | 0.261 | -1.042 |
| glycerol | -0.592 | -0.515 |
| cholesterol | 1.955 | -1.488 |
| AJ | 0.044 | 0.042 |
| Bibs02 | 0.518 | -0.523 |
| Bibs02c | 0.267 | -0.703 |
| BL6 | -0.032 | -0.993 |
| BL6a | 0.0 | -0.894 |
| BXD01 | -0.238 | -0.426 |
| BXD010 | -0.083 | -1.402 |
| BXD011 | -0.417 | -0.563 |
| BXD03 | -0.983 | -0.923 |
| BXD04 | 0.475 | 0.632 |
| BXD05 | -0.581 | -0.967 |
| BXD06 | -0.688 | -1.168 |
| BXD07 | -0.546 | -0.913 |
| BXD08 | -0.352 | -1.242 |
| BXD09 | -0.327 | -1.333 |
| CAST | -0.294 | 0.123 |
| CCcont | -0.725 | -0.225 |
| DS01 | 0.123 | -0.958 |
| DS02 | 0.101 | -1.966 |
| DS04 | 0.507 | 0.298 |
| DS0c | -0.292 | 0.013 |
| GP01 | 0.718 | 0.765 |
| GP02 | 1.993 | 2.108 |
| GP0c | 0.464 | 1.447 |
| NOD | 0.286 | -0.718 |
| NZO | -0.045 | -0.571 |
| PWK | 0.206 | -0.692 |
| H37Rv_KO_CtpC | -0.813 | -1.75 |
| H37Rv_KO_CtpD | 0.312 | -0.895 |
| H37Rv_KO_Rv1272 | 0.223 | -1.317 |
| H37Rv_KO_SugABC | -0.404 | -0.799 |
| H37Rv_KO_MbtN | -0.797 | -0.993 |
| Trans05 | 0.159 | -1.181 |
| macrophage_unactivated | 0.369 | 0.593 |
| IL1 | 0.329 | -0.528 |
| Rapamycin | 0.147 | 0.052 |
| Tcell | 0.137 | -0.58 |
| GMCSF | -0.248 | 0.613 |
| IFNab | -0.526 | -1.088 |
| IFNg | 0.575 | -2.248 |
| IFNg_GMCSF1 | -0.195 | 0.817 |
| Rv1432_day32 | -0.279 | -1.304 |
| Rv1565c_day32 | 0.39 | 0.147 |
| secA2_input | 0.604 | 1.935 |
| delta_Rv3594 | -0.024 | -1.837 |
| delta_Rv3717 | -0.006 | -1.419 |
| delta_Rv3811 | -0.262 | -1.404 |
| delta_Rv0954 | -0.655 | -1.24 |
| PonA1 | 0.084 | -0.39 |
| EccD1_KO | 0.546 | 2.911 |
| EspI_KO | 0.981 | 1.517 |
| PE35_KO | 0.484 | 2.214 |
| PPE68_KO | 0.602 | 3.443 |
| glycerol2 | 0.44 | 1.407 |
| lignocerate | 0.219 | 0.838 |
| oleate | 0.666 | 0.502 |
| phosphatidylcholine | 0.545 | 1.241 |
| acetate | -0.341 | 0.083 |
| glucAc | -0.331 | 0.164 |
| Rv0950ko | 0.395 | -0.727 |
| Rv1096ko | 0.175 | 1.716 |
| Rv3684ko | 0.639 | 0.252 |
| delta_otsA_trehalose | 0.231 | -0.491 |