Top 10 genes with highest correlation to Rv1959c/parE1:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1770/- | (cc=0.4749) | info on Rv1770/- |
| Rv1863c/- | (cc=0.4098) | info on Rv1863c/- |
| Rv2143/- | (cc=0.4081) | info on Rv2143/- |
| Rv2770c/PPE44 | (cc=0.4074) | info on Rv2770c/PPE44 |
| Rv1882c/- | (cc=0.4025) | info on Rv1882c/- |
| Rv1668c/- | (cc=0.3991) | info on Rv1668c/- |
| Rv1871c/- | (cc=0.3959) | info on Rv1871c/- |
| Rv1074c/fadA3 | (cc=0.3943) | info on Rv1074c/fadA3 |
| Rv3121/cyp141 | (cc=0.3925) | info on Rv3121/cyp141 |
| Rv2972c/- | (cc=0.3913) | info on Rv2972c/- |
Correlation of Rv1959c/parE1 with Rv2143/-
Normalized LFCs for Rv1959c/parE1:
(description and provenance of datasets)
| Rv1959c/parE1 | Rv2143/- | |
| Fe_supp_jason_reseq | 0.009 | -0.313 |
| low_pH_jason_reseq | -1.134 | -1.011 |
| NO_jason_reseq | -0.336 | 0.087 |
| B6_jason_reseq | -0.642 | 0.05 |
| MHCII_jason_reseq | 0.022 | 0.391 |
| Isoniazid02 | 0.399 | -1.005 |
| Rifampicin4 | 0.19 | 1.088 |
| Ethambutol3 | 0.034 | -0.967 |
| Meropenem3 | 0.541 | -0.571 |
| Vancomycin16 | 0.239 | -0.493 |
| Rv2680_day32 | -0.014 | -0.412 |
| H37Rv_KO_MarP | -0.464 | -0.238 |
| hypoxia_3wks | -0.243 | 0.79 |
| hypoxia_6wks | 0.182 | 0.589 |
| glycerol | -0.218 | -0.392 |
| cholesterol | -0.259 | 0.062 |
| AJ | 0.422 | 0.476 |
| Bibs02 | -0.34 | -0.056 |
| Bibs02c | -1.125 | -0.623 |
| BL6 | 0.0 | -0.092 |
| BL6a | -0.903 | -0.412 |
| BXD01 | -0.148 | -0.186 |
| BXD010 | 0.426 | -0.791 |
| BXD011 | -0.317 | -0.21 |
| BXD03 | -0.74 | -0.764 |
| BXD04 | -0.165 | -0.476 |
| BXD05 | -0.395 | -0.386 |
| BXD06 | -0.507 | -0.452 |
| BXD07 | -0.23 | -0.315 |
| BXD08 | -0.833 | -0.317 |
| BXD09 | -0.556 | -0.273 |
| CAST | 0.496 | -0.063 |
| CCcont | -0.405 | -0.586 |
| DS01 | 0.291 | -0.222 |
| DS02 | -0.375 | -0.518 |
| DS04 | -0.16 | -0.218 |
| DS0c | 0.025 | -0.622 |
| GP01 | 0.558 | -0.396 |
| GP02 | 0.867 | 0.207 |
| GP0c | 0.261 | -0.392 |
| NOD | 1.516 | 0.535 |
| NZO | 0.1 | 0.633 |
| PWK | -0.236 | 0.298 |
| H37Rv_KO_CtpC | 0.357 | 0.232 |
| H37Rv_KO_CtpD | 0.273 | -0.373 |
| H37Rv_KO_Rv1272 | -0.467 | 0.728 |
| H37Rv_KO_SugABC | -0.706 | 0.223 |
| H37Rv_KO_MbtN | 1.447 | 0.006 |
| Trans05 | 0.244 | 0.309 |
| macrophage_unactivated | -1.136 | -0.044 |
| IL1 | 1.086 | 0.19 |
| Rapamycin | 0.758 | 0.276 |
| Tcell | -0.616 | 0.091 |
| GMCSF | 0.982 | 0.385 |
| IFNab | 1.073 | -0.085 |
| IFNg | 0.184 | 0.037 |
| IFNg_GMCSF1 | 1.266 | 0.311 |
| Rv1432_day32 | 0.018 | 0.795 |
| Rv1565c_day32 | -0.689 | 0.396 |
| secA2_input | -1.398 | -0.531 |
| delta_Rv3594 | -0.02 | -0.011 |
| delta_Rv3717 | 0.298 | 0.123 |
| delta_Rv3811 | 0.207 | -0.457 |
| delta_Rv0954 | 0.601 | -0.074 |
| PonA1 | -0.98 | -1.13 |
| EccD1_KO | 0.546 | 0.257 |
| EspI_KO | 0.405 | -0.011 |
| PE35_KO | 0.607 | -0.79 |
| PPE68_KO | -0.528 | -0.806 |
| glycerol2 | 0.801 | 0.188 |
| lignocerate | 0.196 | 0.265 |
| oleate | 1.144 | 0.644 |
| phosphatidylcholine | 4.052 | 0.455 |
| acetate | -0.469 | -0.224 |
| glucAc | -0.748 | -0.308 |
| Rv0950ko | -0.57 | 0.103 |
| Rv1096ko | -0.458 | -0.841 |
| Rv3684ko | -0.265 | -0.337 |
| delta_otsA_trehalose | 1.713 | 1.355 |