Top 10 genes with highest correlation to Rv1959c/parE1:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1770/- | (cc=0.4749) | info on Rv1770/- |
| Rv1863c/- | (cc=0.4098) | info on Rv1863c/- |
| Rv2143/- | (cc=0.4081) | info on Rv2143/- |
| Rv2770c/PPE44 | (cc=0.4074) | info on Rv2770c/PPE44 |
| Rv1882c/- | (cc=0.4025) | info on Rv1882c/- |
| Rv1668c/- | (cc=0.3991) | info on Rv1668c/- |
| Rv1871c/- | (cc=0.3959) | info on Rv1871c/- |
| Rv1074c/fadA3 | (cc=0.3943) | info on Rv1074c/fadA3 |
| Rv3121/cyp141 | (cc=0.3925) | info on Rv3121/cyp141 |
| Rv2972c/- | (cc=0.3913) | info on Rv2972c/- |
Correlation of Rv1959c/parE1 with Rv1882c/-
Normalized LFCs for Rv1959c/parE1:
(description and provenance of datasets)
| Rv1959c/parE1 | Rv1882c/- | |
| Fe_supp_jason_reseq | 0.009 | 1.157 |
| low_pH_jason_reseq | -1.134 | -0.606 |
| NO_jason_reseq | -0.336 | -0.029 |
| B6_jason_reseq | -0.642 | 0.272 |
| MHCII_jason_reseq | 0.022 | 0.707 |
| Isoniazid02 | 0.399 | 0.179 |
| Rifampicin4 | 0.19 | -0.845 |
| Ethambutol3 | 0.034 | 0.218 |
| Meropenem3 | 0.541 | 0.199 |
| Vancomycin16 | 0.239 | -0.141 |
| Rv2680_day32 | -0.014 | -0.219 |
| H37Rv_KO_MarP | -0.464 | 0.676 |
| hypoxia_3wks | -0.243 | -0.247 |
| hypoxia_6wks | 0.182 | -0.255 |
| glycerol | -0.218 | -0.238 |
| cholesterol | -0.259 | 0.063 |
| AJ | 0.422 | 0.259 |
| Bibs02 | -0.34 | 0.204 |
| Bibs02c | -1.125 | -0.082 |
| BL6 | 0.0 | -0.31 |
| BL6a | -0.903 | -0.606 |
| BXD01 | -0.148 | -0.493 |
| BXD010 | 0.426 | -0.628 |
| BXD011 | -0.317 | -0.311 |
| BXD03 | -0.74 | -0.446 |
| BXD04 | -0.165 | -0.55 |
| BXD05 | -0.395 | -0.465 |
| BXD06 | -0.507 | -0.015 |
| BXD07 | -0.23 | -0.338 |
| BXD08 | -0.833 | -0.46 |
| BXD09 | -0.556 | -0.696 |
| CAST | 0.496 | -0.205 |
| CCcont | -0.405 | -0.393 |
| DS01 | 0.291 | 0.055 |
| DS02 | -0.375 | -0.228 |
| DS04 | -0.16 | -0.076 |
| DS0c | 0.025 | -0.165 |
| GP01 | 0.558 | 0.151 |
| GP02 | 0.867 | 0.244 |
| GP0c | 0.261 | -0.549 |
| NOD | 1.516 | 0.556 |
| NZO | 0.1 | 0.325 |
| PWK | -0.236 | -0.149 |
| H37Rv_KO_CtpC | 0.357 | 0.202 |
| H37Rv_KO_CtpD | 0.273 | -0.863 |
| H37Rv_KO_Rv1272 | -0.467 | 0.366 |
| H37Rv_KO_SugABC | -0.706 | 0.006 |
| H37Rv_KO_MbtN | 1.447 | 0.64 |
| Trans05 | 0.244 | -0.281 |
| macrophage_unactivated | -1.136 | -0.051 |
| IL1 | 1.086 | 0.273 |
| Rapamycin | 0.758 | 0.129 |
| Tcell | -0.616 | 0.283 |
| GMCSF | 0.982 | 0.283 |
| IFNab | 1.073 | -0.063 |
| IFNg | 0.184 | 0.056 |
| IFNg_GMCSF1 | 1.266 | 0.804 |
| Rv1432_day32 | 0.018 | 0.546 |
| Rv1565c_day32 | -0.689 | 0.1 |
| secA2_input | -1.398 | -0.365 |
| delta_Rv3594 | -0.02 | -0.207 |
| delta_Rv3717 | 0.298 | -0.042 |
| delta_Rv3811 | 0.207 | -0.581 |
| delta_Rv0954 | 0.601 | -0.412 |
| PonA1 | -0.98 | -0.294 |
| EccD1_KO | 0.546 | -0.145 |
| EspI_KO | 0.405 | -0.391 |
| PE35_KO | 0.607 | -0.977 |
| PPE68_KO | -0.528 | -0.95 |
| glycerol2 | 0.801 | 0.923 |
| lignocerate | 0.196 | 0.94 |
| oleate | 1.144 | 0.176 |
| phosphatidylcholine | 4.052 | 0.951 |
| acetate | -0.469 | 0.397 |
| glucAc | -0.748 | 0.288 |
| Rv0950ko | -0.57 | 0.57 |
| Rv1096ko | -0.458 | 0.461 |
| Rv3684ko | -0.265 | -0.449 |
| delta_otsA_trehalose | 1.713 | 1.436 |