Top 10 genes with highest correlation to Rv1946c/lppG:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2270/lppN | (cc=0.5926) | info on Rv2270/lppN |
| Rv1436/gap | (cc=0.5795) | info on Rv1436/gap |
| Rv1208/gpgS | (cc=0.5575) | info on Rv1208/gpgS |
| Rv3829c/- | (cc=0.545) | info on Rv3829c/- |
| Rv2673/aftC | (cc=0.5426) | info on Rv2673/aftC |
| Rv2980/- | (cc=0.5327) | info on Rv2980/- |
| Rv2130c/mshC | (cc=0.5326) | info on Rv2130c/mshC |
| Rv3603c/- | (cc=0.5319) | info on Rv3603c/- |
| Rv2847c/cysG | (cc=0.5088) | info on Rv2847c/cysG |
| Rv2537c/aroD | (cc=0.5055) | info on Rv2537c/aroD |
Correlation of Rv1946c/lppG with Rv2270/lppN
Normalized LFCs for Rv1946c/lppG:
(description and provenance of datasets)
| Rv1946c/lppG | Rv2270/lppN | |
| Fe_supp_jason_reseq | -1.197 | 0.71 |
| low_pH_jason_reseq | -0.289 | -0.323 |
| NO_jason_reseq | -0.454 | -0.318 |
| B6_jason_reseq | -0.938 | 0.63 |
| MHCII_jason_reseq | -1.04 | -0.077 |
| Isoniazid02 | -0.313 | -0.26 |
| Rifampicin4 | -0.162 | 0.401 |
| Ethambutol3 | -0.058 | -0.185 |
| Meropenem3 | 0.248 | 0.398 |
| Vancomycin16 | -0.225 | 0.096 |
| Rv2680_day32 | -0.103 | 0.184 |
| H37Rv_KO_MarP | -0.525 | 0.459 |
| hypoxia_3wks | -0.941 | -0.315 |
| hypoxia_6wks | 0.374 | -0.031 |
| glycerol | 1.135 | 0.553 |
| cholesterol | -0.315 | -0.164 |
| AJ | -0.092 | -0.629 |
| Bibs02 | -0.427 | -1.25 |
| Bibs02c | -0.112 | 0.638 |
| BL6 | 0.063 | -1.299 |
| BL6a | 0.198 | -0.033 |
| BXD01 | 0.304 | -0.933 |
| BXD010 | 0.68 | 0.595 |
| BXD011 | -0.428 | 0.081 |
| BXD03 | 0.384 | -1.289 |
| BXD04 | -0.154 | -0.581 |
| BXD05 | -0.661 | 0.086 |
| BXD06 | 0.895 | -0.435 |
| BXD07 | -0.018 | -0.222 |
| BXD08 | -0.268 | -0.931 |
| BXD09 | 0.268 | -0.184 |
| CAST | -0.322 | -0.324 |
| CCcont | -0.143 | -1.924 |
| DS01 | 0.346 | -0.058 |
| DS02 | -0.473 | -0.246 |
| DS04 | -0.214 | -0.505 |
| DS0c | -0.303 | -0.284 |
| GP01 | -1.121 | -0.614 |
| GP02 | -0.67 | -0.102 |
| GP0c | 0.289 | -0.734 |
| NOD | -0.838 | 0.805 |
| NZO | -0.897 | -0.964 |
| PWK | -0.769 | 0.033 |
| H37Rv_KO_CtpC | 0.901 | 0.104 |
| H37Rv_KO_CtpD | 0.095 | -0.251 |
| H37Rv_KO_Rv1272 | 0.089 | 0.998 |
| H37Rv_KO_SugABC | 1.828 | 0.159 |
| H37Rv_KO_MbtN | -0.694 | -0.597 |
| Trans05 | -0.125 | 0.103 |
| macrophage_unactivated | -0.24 | -0.376 |
| IL1 | 0.0 | 0.273 |
| Rapamycin | -0.528 | -0.761 |
| Tcell | -0.613 | -0.124 |
| GMCSF | -0.24 | -0.597 |
| IFNab | 1.267 | -0.057 |
| IFNg | 0.446 | 0.43 |
| IFNg_GMCSF1 | 0.644 | 0.346 |
| Rv1432_day32 | -0.184 | 0.621 |
| Rv1565c_day32 | 0.0 | -1.199 |
| secA2_input | -0.424 | -1.276 |
| delta_Rv3594 | -0.301 | 1.115 |
| delta_Rv3717 | -0.374 | 0.203 |
| delta_Rv3811 | 0.697 | 1.715 |
| delta_Rv0954 | -0.305 | 0.048 |
| PonA1 | -1.929 | -0.235 |
| EccD1_KO | 1.723 | 1.579 |
| EspI_KO | 0.907 | 1.845 |
| PE35_KO | 2.975 | 3.106 |
| PPE68_KO | 2.972 | 3.318 |
| glycerol2 | -0.82 | -1.544 |
| lignocerate | -1.148 | -2.176 |
| oleate | -0.71 | -1.198 |
| phosphatidylcholine | -0.86 | -1.751 |
| acetate | -0.788 | -2.622 |
| glucAc | -1.014 | -2.001 |
| Rv0950ko | 0.44 | 0.464 |
| Rv1096ko | -0.636 | -0.341 |
| Rv3684ko | -0.481 | -0.144 |
| delta_otsA_trehalose | -0.535 | 0.272 |