Top 10 genes with highest correlation to Rv1932/tpx:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0485/- | (cc=0.5767) | info on Rv0485/- |
| Rv3868/eccA1 | (cc=0.5651) | info on Rv3868/eccA1 |
| Rv3574/kstR | (cc=0.5322) | info on Rv3574/kstR |
| Rv1236/sugA | (cc=0.5155) | info on Rv1236/sugA |
| Rv3559c/- | (cc=0.4961) | info on Rv3559c/- |
| Rv0216/- | (cc=0.4924) | info on Rv0216/- |
| Rv1589/bioB | (cc=0.4885) | info on Rv1589/bioB |
| Rv3883c/mycP1 | (cc=0.4876) | info on Rv3883c/mycP1 |
| Rv3870/eccCa1 | (cc=0.4868) | info on Rv3870/eccCa1 |
| Rv2475c/- | (cc=0.4861) | info on Rv2475c/- |
Correlation of Rv1932/tpx with Rv0485/-
Normalized LFCs for Rv1932/tpx:
(description and provenance of datasets)
| Rv1932/tpx | Rv0485/- | |
| Fe_supp_jason_reseq | -0.049 | -0.56 |
| low_pH_jason_reseq | 0.955 | -1.026 |
| NO_jason_reseq | -1.2 | -2.242 |
| B6_jason_reseq | -2.634 | -4.618 |
| MHCII_jason_reseq | -1.876 | -3.592 |
| Isoniazid02 | -1.116 | -0.454 |
| Rifampicin4 | 1.056 | -0.393 |
| Ethambutol3 | 2.13 | 0.181 |
| Meropenem3 | -0.274 | -1.181 |
| Vancomycin16 | -0.316 | -0.557 |
| Rv2680_day32 | -0.898 | -3.166 |
| H37Rv_KO_MarP | 1.497 | 0.24 |
| hypoxia_3wks | -0.187 | 0.159 |
| hypoxia_6wks | 0.685 | -0.722 |
| glycerol | -0.562 | -0.413 |
| cholesterol | -0.279 | -3.975 |
| AJ | -1.845 | -4.686 |
| Bibs02 | -0.982 | -3.876 |
| Bibs02c | -0.403 | -3.778 |
| BL6 | -0.129 | -3.118 |
| BL6a | -0.501 | -4.417 |
| BXD01 | -0.54 | -3.065 |
| BXD010 | -0.549 | -3.013 |
| BXD011 | -0.404 | -2.635 |
| BXD03 | -1.02 | -3.015 |
| BXD04 | -0.344 | -2.757 |
| BXD05 | -1.157 | -2.718 |
| BXD06 | -0.879 | -3.542 |
| BXD07 | -0.677 | -3.674 |
| BXD08 | -1.204 | -3.219 |
| BXD09 | -0.623 | -3.306 |
| CAST | -1.393 | -4.443 |
| CCcont | 0.386 | -0.011 |
| DS01 | -0.4 | -5.006 |
| DS02 | -1.391 | -2.27 |
| DS04 | -0.263 | -4.112 |
| DS0c | 0.02 | -4.381 |
| GP01 | 0.038 | -0.576 |
| GP02 | 1.125 | -0.338 |
| GP0c | 0.144 | -0.379 |
| NOD | -0.742 | -2.302 |
| NZO | -1.715 | -4.028 |
| PWK | -0.058 | -2.842 |
| H37Rv_KO_CtpC | -0.371 | -3.064 |
| H37Rv_KO_CtpD | -0.857 | -1.944 |
| H37Rv_KO_Rv1272 | -0.485 | -2.297 |
| H37Rv_KO_SugABC | -0.874 | -1.715 |
| H37Rv_KO_MbtN | -1.007 | -0.775 |
| Trans05 | -0.522 | -3.074 |
| macrophage_unactivated | 1.446 | 0.189 |
| IL1 | -1.246 | 0.774 |
| Rapamycin | 0.0 | 1.056 |
| Tcell | -0.319 | -1.567 |
| GMCSF | -0.217 | -0.945 |
| IFNab | -0.048 | 0.441 |
| IFNg | -0.695 | -1.403 |
| IFNg_GMCSF1 | 0.242 | -1.697 |
| Rv1432_day32 | -1.395 | -4.519 |
| Rv1565c_day32 | -1.404 | -4.547 |
| secA2_input | 0.554 | 0.492 |
| delta_Rv3594 | -0.702 | 0.032 |
| delta_Rv3717 | -1.277 | -0.671 |
| delta_Rv3811 | 0.106 | -0.064 |
| delta_Rv0954 | 0.836 | 0.862 |
| PonA1 | 0.541 | 0.77 |
| EccD1_KO | -0.493 | 0.174 |
| EspI_KO | -0.04 | 0.297 |
| PE35_KO | 1.552 | 0.193 |
| PPE68_KO | 0.835 | 0.042 |
| glycerol2 | 0.5 | 1.275 |
| lignocerate | -0.302 | 0.315 |
| oleate | -0.037 | -0.065 |
| phosphatidylcholine | -0.929 | 0.77 |
| acetate | 1.014 | -0.043 |
| glucAc | 0.328 | -0.54 |
| Rv0950ko | 0.567 | 0.377 |
| Rv1096ko | 0.422 | 0.47 |
| Rv3684ko | -1.477 | 0.262 |
| delta_otsA_trehalose | 0.684 | -0.263 |