Top 10 genes with highest correlation to Rv1894c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1834/lipZ | (cc=0.6359) | info on Rv1834/lipZ |
| Rv3295/- | (cc=0.6062) | info on Rv3295/- |
| Rv1734c/- | (cc=0.5995) | info on Rv1734c/- |
| Rv0540/- | (cc=0.5729) | info on Rv0540/- |
| Rv3059/cyp136 | (cc=0.5715) | info on Rv3059/cyp136 |
| Rv2633c/- | (cc=0.5691) | info on Rv2633c/- |
| Rv1467c/fadE15 | (cc=0.5609) | info on Rv1467c/fadE15 |
| Rv2030c/- | (cc=0.5563) | info on Rv2030c/- |
| Rv1041c/- | (cc=0.5561) | info on Rv1041c/- |
| Rv2642/- | (cc=0.5404) | info on Rv2642/- |
Correlation of Rv1894c/- with Rv3059/cyp136
Normalized LFCs for Rv1894c/-:
(description and provenance of datasets)
| Rv1894c/- | Rv3059/cyp136 | |
| Fe_supp_jason_reseq | -0.472 | -0.786 |
| low_pH_jason_reseq | -0.959 | -1.248 |
| NO_jason_reseq | 0.588 | -0.438 |
| B6_jason_reseq | 0.018 | -0.289 |
| MHCII_jason_reseq | 0.616 | 0.252 |
| Isoniazid02 | -0.904 | -0.421 |
| Rifampicin4 | -0.125 | -0.766 |
| Ethambutol3 | -0.181 | 0.223 |
| Meropenem3 | 1.114 | -0.298 |
| Vancomycin16 | -0.695 | -0.371 |
| Rv2680_day32 | -0.345 | 0.114 |
| H37Rv_KO_MarP | 0.058 | 0.683 |
| hypoxia_3wks | -0.283 | -0.674 |
| hypoxia_6wks | 0.079 | -0.303 |
| glycerol | 0.064 | -0.919 |
| cholesterol | 0.043 | -1.049 |
| AJ | -0.061 | -0.215 |
| Bibs02 | 0.083 | -1.007 |
| Bibs02c | -0.059 | -0.929 |
| BL6 | -0.702 | -1.607 |
| BL6a | -0.41 | -1.482 |
| BXD01 | -0.256 | -1.374 |
| BXD010 | -0.792 | -1.409 |
| BXD011 | 0.4 | -1.538 |
| BXD03 | -1.064 | -1.053 |
| BXD04 | -1.142 | -0.991 |
| BXD05 | -0.608 | -1.387 |
| BXD06 | -0.848 | -1.515 |
| BXD07 | -0.978 | -1.927 |
| BXD08 | -0.337 | -1.873 |
| BXD09 | -0.823 | -1.449 |
| CAST | 0.656 | -0.038 |
| CCcont | -1.281 | -1.415 |
| DS01 | 0.175 | -0.986 |
| DS02 | -0.129 | -0.813 |
| DS04 | -0.022 | -1.054 |
| DS0c | -0.233 | -0.691 |
| GP01 | -0.748 | -0.195 |
| GP02 | 0.116 | -0.71 |
| GP0c | -0.767 | -1.204 |
| NOD | 1.357 | 0.708 |
| NZO | 0.244 | -0.056 |
| PWK | 0.392 | 0.107 |
| H37Rv_KO_CtpC | -0.069 | -0.899 |
| H37Rv_KO_CtpD | -0.838 | -1.081 |
| H37Rv_KO_Rv1272 | 0.064 | -1.077 |
| H37Rv_KO_SugABC | 0.722 | -0.55 |
| H37Rv_KO_MbtN | 0.827 | -1.428 |
| Trans05 | 0.568 | -0.998 |
| macrophage_unactivated | -0.884 | -0.789 |
| IL1 | -0.578 | -0.934 |
| Rapamycin | -0.957 | -1.381 |
| Tcell | -0.541 | -0.779 |
| GMCSF | -0.325 | -1.03 |
| IFNab | -0.895 | -1.379 |
| IFNg | -1.269 | -1.371 |
| IFNg_GMCSF1 | 0.06 | -0.767 |
| Rv1432_day32 | 0.13 | -0.991 |
| Rv1565c_day32 | 0.289 | 0.009 |
| secA2_input | -0.009 | -0.052 |
| delta_Rv3594 | 0.217 | 0.266 |
| delta_Rv3717 | 0.019 | -0.184 |
| delta_Rv3811 | 0.311 | 0.152 |
| delta_Rv0954 | -0.19 | 0.322 |
| PonA1 | 0.473 | 0.759 |
| EccD1_KO | 0.191 | -0.132 |
| EspI_KO | 0.202 | 0.14 |
| PE35_KO | 0.289 | 0.414 |
| PPE68_KO | 0.042 | 0.202 |
| glycerol2 | 0.769 | 2.535 |
| lignocerate | 0.418 | 1.141 |
| oleate | 1.127 | 0.213 |
| phosphatidylcholine | 0.973 | 2.475 |
| acetate | -0.495 | -0.497 |
| glucAc | -0.634 | -0.382 |
| Rv0950ko | 0.959 | -0.311 |
| Rv1096ko | 0.576 | -0.51 |
| Rv3684ko | 0.75 | -0.851 |
| delta_otsA_trehalose | 0.739 | 0.225 |