Top 10 genes with highest correlation to Rv1894c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1834/lipZ | (cc=0.6359) | info on Rv1834/lipZ |
| Rv3295/- | (cc=0.6062) | info on Rv3295/- |
| Rv1734c/- | (cc=0.5995) | info on Rv1734c/- |
| Rv0540/- | (cc=0.5729) | info on Rv0540/- |
| Rv3059/cyp136 | (cc=0.5715) | info on Rv3059/cyp136 |
| Rv2633c/- | (cc=0.5691) | info on Rv2633c/- |
| Rv1467c/fadE15 | (cc=0.5609) | info on Rv1467c/fadE15 |
| Rv2030c/- | (cc=0.5563) | info on Rv2030c/- |
| Rv1041c/- | (cc=0.5561) | info on Rv1041c/- |
| Rv2642/- | (cc=0.5404) | info on Rv2642/- |
Correlation of Rv1894c/- with Rv1834/lipZ
Normalized LFCs for Rv1894c/-:
(description and provenance of datasets)
| Rv1894c/- | Rv1834/lipZ | |
| Fe_supp_jason_reseq | -0.472 | -1.206 |
| low_pH_jason_reseq | -0.959 | -1.429 |
| NO_jason_reseq | 0.588 | -0.118 |
| B6_jason_reseq | 0.018 | -0.153 |
| MHCII_jason_reseq | 0.616 | 0.675 |
| Isoniazid02 | -0.904 | 0.067 |
| Rifampicin4 | -0.125 | -0.753 |
| Ethambutol3 | -0.181 | -0.409 |
| Meropenem3 | 1.114 | 0.544 |
| Vancomycin16 | -0.695 | -0.589 |
| Rv2680_day32 | -0.345 | 0.179 |
| H37Rv_KO_MarP | 0.058 | -0.199 |
| hypoxia_3wks | -0.283 | -0.494 |
| hypoxia_6wks | 0.079 | 0.693 |
| glycerol | 0.064 | 1.011 |
| cholesterol | 0.043 | -0.287 |
| AJ | -0.061 | 0.183 |
| Bibs02 | 0.083 | 0.154 |
| Bibs02c | -0.059 | 1.15 |
| BL6 | -0.702 | -1.02 |
| BL6a | -0.41 | -0.023 |
| BXD01 | -0.256 | -1.259 |
| BXD010 | -0.792 | -2.69 |
| BXD011 | 0.4 | -1.546 |
| BXD03 | -1.064 | -2.962 |
| BXD04 | -1.142 | -2.493 |
| BXD05 | -0.608 | -1.942 |
| BXD06 | -0.848 | -1.572 |
| BXD07 | -0.978 | -1.875 |
| BXD08 | -0.337 | -1.191 |
| BXD09 | -0.823 | -2.028 |
| CAST | 0.656 | 0.766 |
| CCcont | -1.281 | -1.2 |
| DS01 | 0.175 | 0.147 |
| DS02 | -0.129 | -0.199 |
| DS04 | -0.022 | 0.132 |
| DS0c | -0.233 | -0.143 |
| GP01 | -0.748 | -0.122 |
| GP02 | 0.116 | -0.415 |
| GP0c | -0.767 | -0.737 |
| NOD | 1.357 | 0.353 |
| NZO | 0.244 | 0.069 |
| PWK | 0.392 | 0.318 |
| H37Rv_KO_CtpC | -0.069 | -0.245 |
| H37Rv_KO_CtpD | -0.838 | -0.316 |
| H37Rv_KO_Rv1272 | 0.064 | -0.745 |
| H37Rv_KO_SugABC | 0.722 | -0.204 |
| H37Rv_KO_MbtN | 0.827 | 0.75 |
| Trans05 | 0.568 | -0.469 |
| macrophage_unactivated | -0.884 | -1.569 |
| IL1 | -0.578 | -0.059 |
| Rapamycin | -0.957 | -1.525 |
| Tcell | -0.541 | -1.098 |
| GMCSF | -0.325 | 0.85 |
| IFNab | -0.895 | -1.953 |
| IFNg | -1.269 | -1.328 |
| IFNg_GMCSF1 | 0.06 | -0.679 |
| Rv1432_day32 | 0.13 | 0.674 |
| Rv1565c_day32 | 0.289 | 0.971 |
| secA2_input | -0.009 | 0.218 |
| delta_Rv3594 | 0.217 | -0.541 |
| delta_Rv3717 | 0.019 | -0.18 |
| delta_Rv3811 | 0.311 | -0.039 |
| delta_Rv0954 | -0.19 | -0.012 |
| PonA1 | 0.473 | -0.039 |
| EccD1_KO | 0.191 | 0.881 |
| EspI_KO | 0.202 | 0.607 |
| PE35_KO | 0.289 | 0.125 |
| PPE68_KO | 0.042 | -0.141 |
| glycerol2 | 0.769 | 0.893 |
| lignocerate | 0.418 | 0.955 |
| oleate | 1.127 | -0.157 |
| phosphatidylcholine | 0.973 | 0.609 |
| acetate | -0.495 | 1.199 |
| glucAc | -0.634 | 1.101 |
| Rv0950ko | 0.959 | 0.401 |
| Rv1096ko | 0.576 | 0.67 |
| Rv3684ko | 0.75 | 0.282 |
| delta_otsA_trehalose | 0.739 | 0.908 |