Top 10 genes with highest correlation to Rv1883c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1902c/nanT | (cc=0.4383) | info on Rv1902c/nanT |
| Rv2317/uspB | (cc=0.4278) | info on Rv2317/uspB |
| Rv2019/- | (cc=0.4133) | info on Rv2019/- |
| Rv2491/- | (cc=0.4098) | info on Rv2491/- |
| Rv2675c/- | (cc=0.4051) | info on Rv2675c/- |
| Rv1428c/- | (cc=0.4002) | info on Rv1428c/- |
| Rv3145/nuoA | (cc=0.3969) | info on Rv3145/nuoA |
| Rv1470/trxA | (cc=0.3955) | info on Rv1470/trxA |
| Rv3643/- | (cc=0.395) | info on Rv3643/- |
| Rv1861/- | (cc=0.3857) | info on Rv1861/- |
Correlation of Rv1883c/- with Rv3643/-
Normalized LFCs for Rv1883c/-:
(description and provenance of datasets)
| Rv1883c/- | Rv3643/- | |
| Fe_supp_jason_reseq | 0.082 | 0.011 |
| low_pH_jason_reseq | -1.531 | -0.612 |
| NO_jason_reseq | -0.31 | -0.378 |
| B6_jason_reseq | -0.944 | -0.87 |
| MHCII_jason_reseq | -0.342 | 0.147 |
| Isoniazid02 | -0.287 | -0.013 |
| Rifampicin4 | -0.414 | -0.988 |
| Ethambutol3 | 0.565 | -0.124 |
| Meropenem3 | -1.029 | -0.145 |
| Vancomycin16 | -0.687 | -1.093 |
| Rv2680_day32 | -0.106 | 0.824 |
| H37Rv_KO_MarP | -0.73 | 0.23 |
| hypoxia_3wks | 0.486 | -0.821 |
| hypoxia_6wks | 1.201 | 0.288 |
| glycerol | -0.257 | -2.424 |
| cholesterol | -0.822 | -0.858 |
| AJ | -0.719 | -0.602 |
| Bibs02 | -0.158 | -0.06 |
| Bibs02c | -0.482 | -0.508 |
| BL6 | -0.489 | -0.906 |
| BL6a | -0.109 | -1.884 |
| BXD01 | -0.896 | -3.35 |
| BXD010 | -0.754 | -2.188 |
| BXD011 | 0.878 | -1.273 |
| BXD03 | -0.674 | -1.597 |
| BXD04 | 0.296 | -1.46 |
| BXD05 | -0.345 | -2.02 |
| BXD06 | 0.53 | -1.867 |
| BXD07 | 0.227 | -2.116 |
| BXD08 | -0.496 | -1.962 |
| BXD09 | -0.26 | -2.596 |
| CAST | -0.127 | 0.502 |
| CCcont | -0.548 | -1.763 |
| DS01 | 0.067 | -0.517 |
| DS02 | -0.101 | -1.66 |
| DS04 | 0.155 | -0.72 |
| DS0c | -0.522 | -0.825 |
| GP01 | -0.112 | 0.899 |
| GP02 | -0.154 | -0.635 |
| GP0c | 0.089 | -0.893 |
| NOD | 0.246 | 0.913 |
| NZO | -0.686 | -0.228 |
| PWK | -0.523 | -0.051 |
| H37Rv_KO_CtpC | 1.486 | 0.743 |
| H37Rv_KO_CtpD | -0.746 | 0.584 |
| H37Rv_KO_Rv1272 | 0.54 | 0.129 |
| H37Rv_KO_SugABC | 0.544 | -0.668 |
| H37Rv_KO_MbtN | 0.93 | -0.577 |
| Trans05 | 1.043 | 0.645 |
| macrophage_unactivated | -0.518 | -1.521 |
| IL1 | -0.925 | -1.43 |
| Rapamycin | -0.69 | -1.043 |
| Tcell | -0.28 | -1.571 |
| GMCSF | -0.399 | -1.761 |
| IFNab | -0.577 | -0.698 |
| IFNg | -0.23 | -2.534 |
| IFNg_GMCSF1 | -0.39 | -1.515 |
| Rv1432_day32 | -0.411 | -0.249 |
| Rv1565c_day32 | 0.824 | 0.878 |
| secA2_input | -0.992 | -2.052 |
| delta_Rv3594 | -0.032 | -1.049 |
| delta_Rv3717 | -0.16 | -0.557 |
| delta_Rv3811 | -0.397 | -1.518 |
| delta_Rv0954 | 1.043 | 0.013 |
| PonA1 | 0.357 | 0.419 |
| EccD1_KO | 1.052 | -1.437 |
| EspI_KO | 0.16 | -2.125 |
| PE35_KO | -0.292 | -0.904 |
| PPE68_KO | -0.035 | -0.928 |
| glycerol2 | 0.34 | 0.369 |
| lignocerate | 0.465 | 1.303 |
| oleate | 0.037 | 0.196 |
| phosphatidylcholine | 0.261 | 0.531 |
| acetate | 0.813 | 2.635 |
| glucAc | 0.297 | 0.792 |
| Rv0950ko | 0.555 | -0.292 |
| Rv1096ko | -0.235 | -0.639 |
| Rv3684ko | 0.0 | -0.485 |
| delta_otsA_trehalose | 0.444 | 1.977 |