Top 10 genes with highest correlation to Rv1883c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1902c/nanT | (cc=0.4383) | info on Rv1902c/nanT |
| Rv2317/uspB | (cc=0.4278) | info on Rv2317/uspB |
| Rv2019/- | (cc=0.4133) | info on Rv2019/- |
| Rv2491/- | (cc=0.4098) | info on Rv2491/- |
| Rv2675c/- | (cc=0.4051) | info on Rv2675c/- |
| Rv1428c/- | (cc=0.4002) | info on Rv1428c/- |
| Rv3145/nuoA | (cc=0.3969) | info on Rv3145/nuoA |
| Rv1470/trxA | (cc=0.3955) | info on Rv1470/trxA |
| Rv3643/- | (cc=0.395) | info on Rv3643/- |
| Rv1861/- | (cc=0.3857) | info on Rv1861/- |
Correlation of Rv1883c/- with Rv2317/uspB
Normalized LFCs for Rv1883c/-:
(description and provenance of datasets)
| Rv1883c/- | Rv2317/uspB | |
| Fe_supp_jason_reseq | 0.082 | -0.166 |
| low_pH_jason_reseq | -1.531 | 0.124 |
| NO_jason_reseq | -0.31 | -0.276 |
| B6_jason_reseq | -0.944 | -1.385 |
| MHCII_jason_reseq | -0.342 | -2.319 |
| Isoniazid02 | -0.287 | 0.457 |
| Rifampicin4 | -0.414 | -0.95 |
| Ethambutol3 | 0.565 | -0.049 |
| Meropenem3 | -1.029 | -0.898 |
| Vancomycin16 | -0.687 | 0.202 |
| Rv2680_day32 | -0.106 | 1.177 |
| H37Rv_KO_MarP | -0.73 | -0.281 |
| hypoxia_3wks | 0.486 | -0.921 |
| hypoxia_6wks | 1.201 | -0.232 |
| glycerol | -0.257 | -1.463 |
| cholesterol | -0.822 | -0.796 |
| AJ | -0.719 | -0.487 |
| Bibs02 | -0.158 | -1.005 |
| Bibs02c | -0.482 | -1.516 |
| BL6 | -0.489 | 0.315 |
| BL6a | -0.109 | -0.198 |
| BXD01 | -0.896 | 0.278 |
| BXD010 | -0.754 | -0.426 |
| BXD011 | 0.878 | -0.127 |
| BXD03 | -0.674 | 0.98 |
| BXD04 | 0.296 | 0.74 |
| BXD05 | -0.345 | 0.123 |
| BXD06 | 0.53 | -0.065 |
| BXD07 | 0.227 | 0.349 |
| BXD08 | -0.496 | -0.133 |
| BXD09 | -0.26 | 0.0 |
| CAST | -0.127 | 0.21 |
| CCcont | -0.548 | 0.894 |
| DS01 | 0.067 | -0.946 |
| DS02 | -0.101 | 1.119 |
| DS04 | 0.155 | 0.415 |
| DS0c | -0.522 | -1.373 |
| GP01 | -0.112 | -0.048 |
| GP02 | -0.154 | -0.04 |
| GP0c | 0.089 | 0.706 |
| NOD | 0.246 | 0.0 |
| NZO | -0.686 | 0.092 |
| PWK | -0.523 | -0.196 |
| H37Rv_KO_CtpC | 1.486 | 2.149 |
| H37Rv_KO_CtpD | -0.746 | -0.266 |
| H37Rv_KO_Rv1272 | 0.54 | 1.574 |
| H37Rv_KO_SugABC | 0.544 | 2.402 |
| H37Rv_KO_MbtN | 0.93 | 0.26 |
| Trans05 | 1.043 | 2.734 |
| macrophage_unactivated | -0.518 | -1.774 |
| IL1 | -0.925 | -2.094 |
| Rapamycin | -0.69 | 0.0 |
| Tcell | -0.28 | -0.828 |
| GMCSF | -0.399 | -0.671 |
| IFNab | -0.577 | -0.444 |
| IFNg | -0.23 | -1.502 |
| IFNg_GMCSF1 | -0.39 | 0.283 |
| Rv1432_day32 | -0.411 | 0.0 |
| Rv1565c_day32 | 0.824 | 0.381 |
| secA2_input | -0.992 | -0.916 |
| delta_Rv3594 | -0.032 | 1.234 |
| delta_Rv3717 | -0.16 | 2.175 |
| delta_Rv3811 | -0.397 | 1.123 |
| delta_Rv0954 | 1.043 | 0.32 |
| PonA1 | 0.357 | 0.452 |
| EccD1_KO | 1.052 | -0.122 |
| EspI_KO | 0.16 | -0.433 |
| PE35_KO | -0.292 | -0.563 |
| PPE68_KO | -0.035 | 0.937 |
| glycerol2 | 0.34 | 0.981 |
| lignocerate | 0.465 | 0.559 |
| oleate | 0.037 | -0.086 |
| phosphatidylcholine | 0.261 | 0.643 |
| acetate | 0.813 | 1.102 |
| glucAc | 0.297 | 1.153 |
| Rv0950ko | 0.555 | 0.323 |
| Rv1096ko | -0.235 | 0.323 |
| Rv3684ko | 0.0 | -0.789 |
| delta_otsA_trehalose | 0.444 | -1.061 |