Top 10 genes with highest correlation to Rv1865c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3703c/- | (cc=0.5176) | info on Rv3703c/- |
| Rv0829/- | (cc=0.4997) | info on Rv0829/- |
| Rv1907c/- | (cc=0.4977) | info on Rv1907c/- |
| Rv3059/cyp136 | (cc=0.4884) | info on Rv3059/cyp136 |
| Rv1228/lpqX | (cc=0.4785) | info on Rv1228/lpqX |
| Rv2895c/viuB | (cc=0.4709) | info on Rv2895c/viuB |
| Rv0776c/- | (cc=0.4631) | info on Rv0776c/- |
| Rv1725c/- | (cc=0.4621) | info on Rv1725c/- |
| Rv2405/- | (cc=0.456) | info on Rv2405/- |
| Rv1103c/mazE3 | (cc=0.4492) | info on Rv1103c/mazE3 |
Correlation of Rv1865c/- with Rv1907c/-
Normalized LFCs for Rv1865c/-:
(description and provenance of datasets)
| Rv1865c/- | Rv1907c/- | |
| Fe_supp_jason_reseq | -2.036 | -0.608 |
| low_pH_jason_reseq | -0.918 | -0.41 |
| NO_jason_reseq | -0.475 | -0.121 |
| B6_jason_reseq | -0.006 | -0.581 |
| MHCII_jason_reseq | -0.59 | 0.0 |
| Isoniazid02 | 0.18 | 1.03 |
| Rifampicin4 | -0.401 | 0.236 |
| Ethambutol3 | -0.373 | 1.12 |
| Meropenem3 | 0.034 | 0.231 |
| Vancomycin16 | -0.31 | 0.101 |
| Rv2680_day32 | -0.454 | -0.433 |
| H37Rv_KO_MarP | 0.133 | -0.052 |
| hypoxia_3wks | 0.0 | -0.259 |
| hypoxia_6wks | -0.662 | -0.219 |
| glycerol | -0.032 | 0.0 |
| cholesterol | 0.348 | -0.024 |
| AJ | -0.05 | 0.321 |
| Bibs02 | -0.183 | -0.346 |
| Bibs02c | -0.297 | 0.15 |
| BL6 | -0.475 | -1.272 |
| BL6a | -0.392 | -0.433 |
| BXD01 | -0.185 | -0.272 |
| BXD010 | -0.448 | 0.301 |
| BXD011 | -0.523 | -0.719 |
| BXD03 | -0.127 | -0.31 |
| BXD04 | -0.293 | -0.151 |
| BXD05 | -0.511 | -0.228 |
| BXD06 | -0.362 | -0.481 |
| BXD07 | -0.844 | -0.143 |
| BXD08 | 0.089 | -0.418 |
| BXD09 | -0.566 | -1.029 |
| CAST | -0.34 | 0.075 |
| CCcont | -0.556 | -0.421 |
| DS01 | -0.236 | 0.72 |
| DS02 | -0.826 | 0.438 |
| DS04 | -0.621 | 0.951 |
| DS0c | 0.371 | 0.688 |
| GP01 | 0.151 | -0.187 |
| GP02 | 0.386 | -0.667 |
| GP0c | -0.122 | 0.61 |
| NOD | -0.473 | 0.407 |
| NZO | -0.188 | 0.049 |
| PWK | 0.361 | 0.548 |
| H37Rv_KO_CtpC | -0.162 | -0.388 |
| H37Rv_KO_CtpD | -0.592 | 0.928 |
| H37Rv_KO_Rv1272 | 0.481 | 0.43 |
| H37Rv_KO_SugABC | 1.034 | 0.592 |
| H37Rv_KO_MbtN | -0.552 | -0.145 |
| Trans05 | -0.115 | 0.681 |
| macrophage_unactivated | -0.129 | 0.429 |
| IL1 | 0.884 | -0.047 |
| Rapamycin | -0.42 | -0.301 |
| Tcell | -0.235 | 0.052 |
| GMCSF | -0.19 | -1.716 |
| IFNab | -0.381 | -1.022 |
| IFNg | -0.366 | -1.122 |
| IFNg_GMCSF1 | -0.129 | 0.776 |
| Rv1432_day32 | -0.029 | 0.348 |
| Rv1565c_day32 | 0.986 | 0.441 |
| secA2_input | 0.867 | 1.177 |
| delta_Rv3594 | 0.866 | 2.291 |
| delta_Rv3717 | 0.722 | 0.984 |
| delta_Rv3811 | 1.069 | 1.561 |
| delta_Rv0954 | 0.43 | 0.561 |
| PonA1 | 0.331 | 1.064 |
| EccD1_KO | -0.309 | -0.358 |
| EspI_KO | 0.128 | 0.074 |
| PE35_KO | -0.053 | 0.187 |
| PPE68_KO | -0.761 | 0.589 |
| glycerol2 | 0.991 | 1.61 |
| lignocerate | 0.689 | 1.153 |
| oleate | 1.194 | 0.662 |
| phosphatidylcholine | 1.057 | 1.382 |
| acetate | 0.389 | 2.678 |
| glucAc | 0.211 | 0.964 |
| Rv0950ko | 0.181 | -0.691 |
| Rv1096ko | -0.283 | 0.85 |
| Rv3684ko | -0.134 | 0.75 |
| delta_otsA_trehalose | -0.4 | 0.684 |