Top 10 genes with highest correlation to Rv1865c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3703c/- | (cc=0.5176) | info on Rv3703c/- |
| Rv0829/- | (cc=0.4997) | info on Rv0829/- |
| Rv1907c/- | (cc=0.4977) | info on Rv1907c/- |
| Rv3059/cyp136 | (cc=0.4884) | info on Rv3059/cyp136 |
| Rv1228/lpqX | (cc=0.4785) | info on Rv1228/lpqX |
| Rv2895c/viuB | (cc=0.4709) | info on Rv2895c/viuB |
| Rv0776c/- | (cc=0.4631) | info on Rv0776c/- |
| Rv1725c/- | (cc=0.4621) | info on Rv1725c/- |
| Rv2405/- | (cc=0.456) | info on Rv2405/- |
| Rv1103c/mazE3 | (cc=0.4492) | info on Rv1103c/mazE3 |
Correlation of Rv1865c/- with Rv1228/lpqX
Normalized LFCs for Rv1865c/-:
(description and provenance of datasets)
| Rv1865c/- | Rv1228/lpqX | |
| Fe_supp_jason_reseq | -2.036 | -0.538 |
| low_pH_jason_reseq | -0.918 | -0.708 |
| NO_jason_reseq | -0.475 | -0.113 |
| B6_jason_reseq | -0.006 | 0.293 |
| MHCII_jason_reseq | -0.59 | -0.4 |
| Isoniazid02 | 0.18 | 0.8 |
| Rifampicin4 | -0.401 | -0.008 |
| Ethambutol3 | -0.373 | 1.6 |
| Meropenem3 | 0.034 | 0.714 |
| Vancomycin16 | -0.31 | -0.265 |
| Rv2680_day32 | -0.454 | -0.468 |
| H37Rv_KO_MarP | 0.133 | 0.251 |
| hypoxia_3wks | 0.0 | -0.06 |
| hypoxia_6wks | -0.662 | 0.192 |
| glycerol | -0.032 | 0.477 |
| cholesterol | 0.348 | -0.366 |
| AJ | -0.05 | 0.106 |
| Bibs02 | -0.183 | 0.301 |
| Bibs02c | -0.297 | -0.573 |
| BL6 | -0.475 | -0.277 |
| BL6a | -0.392 | -0.342 |
| BXD01 | -0.185 | -0.593 |
| BXD010 | -0.448 | -0.297 |
| BXD011 | -0.523 | -0.278 |
| BXD03 | -0.127 | -0.506 |
| BXD04 | -0.293 | -0.42 |
| BXD05 | -0.511 | -0.16 |
| BXD06 | -0.362 | -0.505 |
| BXD07 | -0.844 | 0.154 |
| BXD08 | 0.089 | -0.562 |
| BXD09 | -0.566 | -0.12 |
| CAST | -0.34 | -0.534 |
| CCcont | -0.556 | -0.306 |
| DS01 | -0.236 | -0.621 |
| DS02 | -0.826 | -0.381 |
| DS04 | -0.621 | 0.226 |
| DS0c | 0.371 | -0.198 |
| GP01 | 0.151 | 0.303 |
| GP02 | 0.386 | 0.887 |
| GP0c | -0.122 | -0.073 |
| NOD | -0.473 | -0.018 |
| NZO | -0.188 | 0.462 |
| PWK | 0.361 | 0.037 |
| H37Rv_KO_CtpC | -0.162 | -1.065 |
| H37Rv_KO_CtpD | -0.592 | -1.041 |
| H37Rv_KO_Rv1272 | 0.481 | 0.022 |
| H37Rv_KO_SugABC | 1.034 | 1.225 |
| H37Rv_KO_MbtN | -0.552 | -0.556 |
| Trans05 | -0.115 | 0.056 |
| macrophage_unactivated | -0.129 | -0.237 |
| IL1 | 0.884 | 0.169 |
| Rapamycin | -0.42 | -0.025 |
| Tcell | -0.235 | -0.283 |
| GMCSF | -0.19 | -0.032 |
| IFNab | -0.381 | -0.166 |
| IFNg | -0.366 | -0.233 |
| IFNg_GMCSF1 | -0.129 | -0.198 |
| Rv1432_day32 | -0.029 | 0.511 |
| Rv1565c_day32 | 0.986 | 0.161 |
| secA2_input | 0.867 | -0.066 |
| delta_Rv3594 | 0.866 | 0.597 |
| delta_Rv3717 | 0.722 | 0.934 |
| delta_Rv3811 | 1.069 | 0.635 |
| delta_Rv0954 | 0.43 | 1.355 |
| PonA1 | 0.331 | 0.833 |
| EccD1_KO | -0.309 | 0.793 |
| EspI_KO | 0.128 | 0.117 |
| PE35_KO | -0.053 | 0.79 |
| PPE68_KO | -0.761 | 0.186 |
| glycerol2 | 0.991 | 0.179 |
| lignocerate | 0.689 | 0.934 |
| oleate | 1.194 | 0.204 |
| phosphatidylcholine | 1.057 | 0.608 |
| acetate | 0.389 | 0.342 |
| glucAc | 0.211 | 0.435 |
| Rv0950ko | 0.181 | -0.639 |
| Rv1096ko | -0.283 | -0.935 |
| Rv3684ko | -0.134 | -0.662 |
| delta_otsA_trehalose | -0.4 | -0.722 |