Top 10 genes with highest correlation to Rv1865c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3703c/- | (cc=0.5176) | info on Rv3703c/- |
| Rv0829/- | (cc=0.4997) | info on Rv0829/- |
| Rv1907c/- | (cc=0.4977) | info on Rv1907c/- |
| Rv3059/cyp136 | (cc=0.4884) | info on Rv3059/cyp136 |
| Rv1228/lpqX | (cc=0.4785) | info on Rv1228/lpqX |
| Rv2895c/viuB | (cc=0.4709) | info on Rv2895c/viuB |
| Rv0776c/- | (cc=0.4631) | info on Rv0776c/- |
| Rv1725c/- | (cc=0.4621) | info on Rv1725c/- |
| Rv2405/- | (cc=0.456) | info on Rv2405/- |
| Rv1103c/mazE3 | (cc=0.4492) | info on Rv1103c/mazE3 |
Correlation of Rv1865c/- with Rv3703c/-
Normalized LFCs for Rv1865c/-:
(description and provenance of datasets)
| Rv1865c/- | Rv3703c/- | |
| Fe_supp_jason_reseq | -2.036 | -0.893 |
| low_pH_jason_reseq | -0.918 | -0.622 |
| NO_jason_reseq | -0.475 | -0.189 |
| B6_jason_reseq | -0.006 | -0.733 |
| MHCII_jason_reseq | -0.59 | -0.868 |
| Isoniazid02 | 0.18 | 0.058 |
| Rifampicin4 | -0.401 | -0.111 |
| Ethambutol3 | -0.373 | -0.181 |
| Meropenem3 | 0.034 | -0.392 |
| Vancomycin16 | -0.31 | -0.22 |
| Rv2680_day32 | -0.454 | -0.954 |
| H37Rv_KO_MarP | 0.133 | 0.484 |
| hypoxia_3wks | 0.0 | -1.021 |
| hypoxia_6wks | -0.662 | -0.58 |
| glycerol | -0.032 | -0.44 |
| cholesterol | 0.348 | -0.692 |
| AJ | -0.05 | -0.782 |
| Bibs02 | -0.183 | -0.817 |
| Bibs02c | -0.297 | -2.052 |
| BL6 | -0.475 | -0.502 |
| BL6a | -0.392 | -1.725 |
| BXD01 | -0.185 | -1.046 |
| BXD010 | -0.448 | -0.934 |
| BXD011 | -0.523 | -0.929 |
| BXD03 | -0.127 | -1.057 |
| BXD04 | -0.293 | -1.02 |
| BXD05 | -0.511 | -0.633 |
| BXD06 | -0.362 | -0.833 |
| BXD07 | -0.844 | -1.569 |
| BXD08 | 0.089 | -0.747 |
| BXD09 | -0.566 | -1.307 |
| CAST | -0.34 | -0.157 |
| CCcont | -0.556 | -1.03 |
| DS01 | -0.236 | -0.984 |
| DS02 | -0.826 | -1.128 |
| DS04 | -0.621 | -1.21 |
| DS0c | 0.371 | -0.715 |
| GP01 | 0.151 | 0.109 |
| GP02 | 0.386 | -0.744 |
| GP0c | -0.122 | 0.54 |
| NOD | -0.473 | 0.649 |
| NZO | -0.188 | -0.985 |
| PWK | 0.361 | -0.176 |
| H37Rv_KO_CtpC | -0.162 | -0.558 |
| H37Rv_KO_CtpD | -0.592 | -0.556 |
| H37Rv_KO_Rv1272 | 0.481 | -1.057 |
| H37Rv_KO_SugABC | 1.034 | -0.168 |
| H37Rv_KO_MbtN | -0.552 | 0.575 |
| Trans05 | -0.115 | -1.007 |
| macrophage_unactivated | -0.129 | 0.322 |
| IL1 | 0.884 | 0.0 |
| Rapamycin | -0.42 | 0.0 |
| Tcell | -0.235 | -0.036 |
| GMCSF | -0.19 | -0.029 |
| IFNab | -0.381 | 0.063 |
| IFNg | -0.366 | 0.112 |
| IFNg_GMCSF1 | -0.129 | -0.204 |
| Rv1432_day32 | -0.029 | 0.012 |
| Rv1565c_day32 | 0.986 | -0.463 |
| secA2_input | 0.867 | 0.532 |
| delta_Rv3594 | 0.866 | 0.577 |
| delta_Rv3717 | 0.722 | 0.641 |
| delta_Rv3811 | 1.069 | 0.935 |
| delta_Rv0954 | 0.43 | 1.023 |
| PonA1 | 0.331 | 1.393 |
| EccD1_KO | -0.309 | -0.878 |
| EspI_KO | 0.128 | -0.673 |
| PE35_KO | -0.053 | -0.621 |
| PPE68_KO | -0.761 | -1.597 |
| glycerol2 | 0.991 | 0.528 |
| lignocerate | 0.689 | 0.686 |
| oleate | 1.194 | 1.104 |
| phosphatidylcholine | 1.057 | 0.384 |
| acetate | 0.389 | 0.961 |
| glucAc | 0.211 | 0.67 |
| Rv0950ko | 0.181 | 0.594 |
| Rv1096ko | -0.283 | 0.651 |
| Rv3684ko | -0.134 | 0.318 |
| delta_otsA_trehalose | -0.4 | 0.151 |