Top 10 genes with highest correlation to Rv1850/ureC:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2274c/mazF8 | (cc=0.5529) | info on Rv2274c/mazF8 |
| Rv1364c/- | (cc=0.4968) | info on Rv1364c/- |
| Rv1571/- | (cc=0.4867) | info on Rv1571/- |
| Rv1920/- | (cc=0.4828) | info on Rv1920/- |
| Rv2275/- | (cc=0.482) | info on Rv2275/- |
| Rv2818c/- | (cc=0.4719) | info on Rv2818c/- |
| Rv1504c/- | (cc=0.464) | info on Rv1504c/- |
| Rv1551/plsB1 | (cc=0.4528) | info on Rv1551/plsB1 |
| Rv0505c/serB1 | (cc=0.4448) | info on Rv0505c/serB1 |
| Rv2847c/cysG | (cc=0.4396) | info on Rv2847c/cysG |
Correlation of Rv1850/ureC with Rv1571/-
Normalized LFCs for Rv1850/ureC:
(description and provenance of datasets)
| Rv1850/ureC | Rv1571/- | |
| Fe_supp_jason_reseq | -0.583 | 0.923 |
| low_pH_jason_reseq | -0.756 | -1.419 |
| NO_jason_reseq | -0.386 | -2.226 |
| B6_jason_reseq | -0.675 | -0.403 |
| MHCII_jason_reseq | -0.715 | -0.829 |
| Isoniazid02 | -0.288 | -0.063 |
| Rifampicin4 | 0.252 | 1.346 |
| Ethambutol3 | -0.479 | 0.53 |
| Meropenem3 | 0.948 | 0.981 |
| Vancomycin16 | -0.448 | 0.525 |
| Rv2680_day32 | -0.1 | 0.0 |
| H37Rv_KO_MarP | -0.155 | -1.772 |
| hypoxia_3wks | 0.044 | 0.0 |
| hypoxia_6wks | 0.758 | -0.288 |
| glycerol | -0.219 | -0.202 |
| cholesterol | 0.323 | 0.659 |
| AJ | 0.439 | -0.232 |
| Bibs02 | -0.842 | -0.183 |
| Bibs02c | 0.483 | -0.209 |
| BL6 | 0.289 | -0.125 |
| BL6a | 0.268 | -0.198 |
| BXD01 | 0.853 | -0.13 |
| BXD010 | 0.53 | -0.128 |
| BXD011 | 0.0 | -0.127 |
| BXD03 | 0.302 | -0.135 |
| BXD04 | 0.642 | -0.124 |
| BXD05 | -0.293 | -0.135 |
| BXD06 | 0.341 | -0.133 |
| BXD07 | 0.543 | 0.0 |
| BXD08 | 0.193 | -0.133 |
| BXD09 | 0.165 | -0.14 |
| CAST | -0.591 | 0.581 |
| CCcont | -0.048 | 0.376 |
| DS01 | 0.426 | 1.075 |
| DS02 | 0.353 | -0.217 |
| DS04 | 0.464 | 1.495 |
| DS0c | -0.115 | -0.217 |
| GP01 | -0.685 | -0.099 |
| GP02 | -0.577 | -0.083 |
| GP0c | -0.171 | -0.13 |
| NOD | -0.667 | -0.225 |
| NZO | 0.081 | -0.199 |
| PWK | -0.583 | 0.0 |
| H37Rv_KO_CtpC | 0.016 | -0.162 |
| H37Rv_KO_CtpD | -0.26 | 0.116 |
| H37Rv_KO_Rv1272 | 0.688 | 3.081 |
| H37Rv_KO_SugABC | 0.212 | 0.09 |
| H37Rv_KO_MbtN | 1.53 | -0.103 |
| Trans05 | 0.576 | 1.796 |
| macrophage_unactivated | -0.17 | -0.83 |
| IL1 | 0.306 | 0.0 |
| Rapamycin | 0.353 | 3.591 |
| Tcell | 0.909 | 1.352 |
| GMCSF | 0.647 | -0.694 |
| IFNab | -0.248 | 0.0 |
| IFNg | -0.11 | -0.703 |
| IFNg_GMCSF1 | -0.258 | -0.826 |
| Rv1432_day32 | -0.074 | 0.0 |
| Rv1565c_day32 | 0.366 | 0.0 |
| secA2_input | -1.104 | -1.398 |
| delta_Rv3594 | 0.682 | 2.091 |
| delta_Rv3717 | 0.44 | 1.72 |
| delta_Rv3811 | 0.054 | -0.116 |
| delta_Rv0954 | -0.6 | 1.84 |
| PonA1 | -0.199 | 0.0 |
| EccD1_KO | 0.362 | 2.0 |
| EspI_KO | -0.054 | 3.73 |
| PE35_KO | 0.895 | 2.497 |
| PPE68_KO | 1.267 | 2.086 |
| glycerol2 | -0.659 | 0.0 |
| lignocerate | -0.067 | 0.462 |
| oleate | -0.445 | 0.0 |
| phosphatidylcholine | 0.09 | 0.0 |
| acetate | -0.455 | 0.0 |
| glucAc | -0.297 | 0.0 |
| Rv0950ko | -1.96 | -3.395 |
| Rv1096ko | -0.742 | -0.38 |
| Rv3684ko | -0.593 | -1.359 |
| delta_otsA_trehalose | 0.231 | 0.0 |