Top 10 genes with highest correlation to Rv1829/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3866/espG1 | (cc=0.6173) | info on Rv3866/espG1 |
| Rv1193/fadD36 | (cc=0.5799) | info on Rv1193/fadD36 |
| Rv3544c/fadE28 | (cc=0.5768) | info on Rv3544c/fadE28 |
| Rv3615c/espC | (cc=0.5633) | info on Rv3615c/espC |
| Rv3160c/- | (cc=0.5616) | info on Rv3160c/- |
| Rv1590/- | (cc=0.5613) | info on Rv1590/- |
| Rv1109c/- | (cc=0.5543) | info on Rv1109c/- |
| Rv0485/- | (cc=0.5536) | info on Rv0485/- |
| Rv3868/eccA1 | (cc=0.5489) | info on Rv3868/eccA1 |
| Rv3882c/eccE1 | (cc=0.5438) | info on Rv3882c/eccE1 |
Correlation of Rv1829/- with Rv3615c/espC
Normalized LFCs for Rv1829/-:
(description and provenance of datasets)
| Rv1829/- | Rv3615c/espC | |
| Fe_supp_jason_reseq | -0.062 | -0.076 |
| low_pH_jason_reseq | -0.663 | -0.791 |
| NO_jason_reseq | -3.226 | -0.179 |
| B6_jason_reseq | -3.226 | -2.738 |
| MHCII_jason_reseq | -2.269 | -3.219 |
| Isoniazid02 | 2.057 | -1.534 |
| Rifampicin4 | 1.099 | 0.663 |
| Ethambutol3 | 1.321 | 0.61 |
| Meropenem3 | -1.388 | -0.927 |
| Vancomycin16 | 1.162 | -0.438 |
| Rv2680_day32 | -0.8 | -2.287 |
| H37Rv_KO_MarP | -2.028 | 0.763 |
| hypoxia_3wks | -0.279 | -0.642 |
| hypoxia_6wks | -0.856 | -0.453 |
| glycerol | 0.576 | -1.542 |
| cholesterol | -0.294 | -2.127 |
| AJ | -1.729 | -4.615 |
| Bibs02 | -3.113 | -6.0 |
| Bibs02c | -2.827 | -5.515 |
| BL6 | -1.787 | -1.925 |
| BL6a | 0.079 | -4.038 |
| BXD01 | -1.496 | -2.432 |
| BXD010 | -1.066 | -1.317 |
| BXD011 | 0.051 | -2.379 |
| BXD03 | -0.952 | -2.734 |
| BXD04 | -0.191 | -1.094 |
| BXD05 | 0.297 | -2.385 |
| BXD06 | -0.374 | -3.264 |
| BXD07 | -0.975 | -2.435 |
| BXD08 | -1.107 | -3.429 |
| BXD09 | -0.12 | -3.21 |
| CAST | -2.508 | -4.656 |
| CCcont | 1.496 | 0.08 |
| DS01 | -1.311 | -5.297 |
| DS02 | -3.486 | -6.0 |
| DS04 | -0.443 | -3.797 |
| DS0c | -2.011 | -6.0 |
| GP01 | 0.425 | -1.918 |
| GP02 | 0.263 | -2.771 |
| GP0c | 0.694 | -0.687 |
| NOD | -1.769 | -0.556 |
| NZO | -1.176 | -4.599 |
| PWK | -2.965 | -5.419 |
| H37Rv_KO_CtpC | -0.371 | -1.589 |
| H37Rv_KO_CtpD | 0.0 | -0.43 |
| H37Rv_KO_Rv1272 | 0.084 | -1.432 |
| H37Rv_KO_SugABC | 1.277 | -1.494 |
| H37Rv_KO_MbtN | 2.41 | 0.721 |
| Trans05 | -0.202 | -1.485 |
| macrophage_unactivated | 0.527 | -1.203 |
| IL1 | 0.219 | -0.303 |
| Rapamycin | 0.58 | -0.761 |
| Tcell | 1.033 | -2.278 |
| GMCSF | 0.673 | 0.887 |
| IFNab | 1.533 | 0.629 |
| IFNg | -0.826 | -1.924 |
| IFNg_GMCSF1 | -2.341 | -1.304 |
| Rv1432_day32 | -2.383 | -2.181 |
| Rv1565c_day32 | -1.741 | -3.023 |
| secA2_input | -0.789 | 0.844 |
| delta_Rv3594 | 2.452 | 0.45 |
| delta_Rv3717 | 1.781 | -0.276 |
| delta_Rv3811 | 2.074 | -0.611 |
| delta_Rv0954 | 1.499 | 0.062 |
| PonA1 | -0.196 | -1.032 |
| EccD1_KO | 1.039 | -0.247 |
| EspI_KO | 0.411 | -0.639 |
| PE35_KO | 0.945 | -0.096 |
| PPE68_KO | 1.037 | -0.403 |
| glycerol2 | 2.159 | 0.556 |
| lignocerate | -1.218 | 0.544 |
| oleate | -0.651 | -0.103 |
| phosphatidylcholine | -0.774 | -0.066 |
| acetate | -0.111 | -0.146 |
| glucAc | -0.785 | -0.122 |
| Rv0950ko | -0.142 | -0.256 |
| Rv1096ko | -1.731 | -1.122 |
| Rv3684ko | -2.473 | -0.668 |
| delta_otsA_trehalose | 0.002 | 1.448 |