Top 10 genes with highest correlation to Rv1829/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3866/espG1 | (cc=0.6173) | info on Rv3866/espG1 |
| Rv1193/fadD36 | (cc=0.5799) | info on Rv1193/fadD36 |
| Rv3544c/fadE28 | (cc=0.5768) | info on Rv3544c/fadE28 |
| Rv3615c/espC | (cc=0.5633) | info on Rv3615c/espC |
| Rv3160c/- | (cc=0.5616) | info on Rv3160c/- |
| Rv1590/- | (cc=0.5613) | info on Rv1590/- |
| Rv1109c/- | (cc=0.5543) | info on Rv1109c/- |
| Rv0485/- | (cc=0.5536) | info on Rv0485/- |
| Rv3868/eccA1 | (cc=0.5489) | info on Rv3868/eccA1 |
| Rv3882c/eccE1 | (cc=0.5438) | info on Rv3882c/eccE1 |
Correlation of Rv1829/- with Rv1109c/-
Normalized LFCs for Rv1829/-:
(description and provenance of datasets)
| Rv1829/- | Rv1109c/- | |
| Fe_supp_jason_reseq | -0.062 | 0.666 |
| low_pH_jason_reseq | -0.663 | -0.069 |
| NO_jason_reseq | -3.226 | -0.837 |
| B6_jason_reseq | -3.226 | -1.372 |
| MHCII_jason_reseq | -2.269 | -0.925 |
| Isoniazid02 | 2.057 | 0.837 |
| Rifampicin4 | 1.099 | -0.636 |
| Ethambutol3 | 1.321 | 0.952 |
| Meropenem3 | -1.388 | 0.329 |
| Vancomycin16 | 1.162 | -0.576 |
| Rv2680_day32 | -0.8 | -0.461 |
| H37Rv_KO_MarP | -2.028 | -0.742 |
| hypoxia_3wks | -0.279 | 0.195 |
| hypoxia_6wks | -0.856 | 0.136 |
| glycerol | 0.576 | 0.983 |
| cholesterol | -0.294 | 0.101 |
| AJ | -1.729 | -2.681 |
| Bibs02 | -3.113 | -1.534 |
| Bibs02c | -2.827 | 0.681 |
| BL6 | -1.787 | 0.261 |
| BL6a | 0.079 | 0.676 |
| BXD01 | -1.496 | 0.339 |
| BXD010 | -1.066 | -0.31 |
| BXD011 | 0.051 | 1.074 |
| BXD03 | -0.952 | -0.722 |
| BXD04 | -0.191 | 0.409 |
| BXD05 | 0.297 | -0.671 |
| BXD06 | -0.374 | -0.229 |
| BXD07 | -0.975 | 0.272 |
| BXD08 | -1.107 | -0.029 |
| BXD09 | -0.12 | 0.189 |
| CAST | -2.508 | -2.611 |
| CCcont | 1.496 | 0.517 |
| DS01 | -1.311 | -0.347 |
| DS02 | -3.486 | 0.334 |
| DS04 | -0.443 | -1.448 |
| DS0c | -2.011 | -1.106 |
| GP01 | 0.425 | -0.426 |
| GP02 | 0.263 | -0.711 |
| GP0c | 0.694 | -0.268 |
| NOD | -1.769 | -2.319 |
| NZO | -1.176 | -1.946 |
| PWK | -2.965 | -2.693 |
| H37Rv_KO_CtpC | -0.371 | 0.091 |
| H37Rv_KO_CtpD | 0.0 | 1.105 |
| H37Rv_KO_Rv1272 | 0.084 | -0.608 |
| H37Rv_KO_SugABC | 1.277 | 0.393 |
| H37Rv_KO_MbtN | 2.41 | 0.285 |
| Trans05 | -0.202 | -0.353 |
| macrophage_unactivated | 0.527 | 1.25 |
| IL1 | 0.219 | 1.258 |
| Rapamycin | 0.58 | 0.506 |
| Tcell | 1.033 | 0.668 |
| GMCSF | 0.673 | 0.177 |
| IFNab | 1.533 | 0.599 |
| IFNg | -0.826 | 0.369 |
| IFNg_GMCSF1 | -2.341 | -0.559 |
| Rv1432_day32 | -2.383 | -2.095 |
| Rv1565c_day32 | -1.741 | -2.199 |
| secA2_input | -0.789 | 1.035 |
| delta_Rv3594 | 2.452 | 1.361 |
| delta_Rv3717 | 1.781 | 0.148 |
| delta_Rv3811 | 2.074 | 0.271 |
| delta_Rv0954 | 1.499 | 1.585 |
| PonA1 | -0.196 | 1.165 |
| EccD1_KO | 1.039 | 1.276 |
| EspI_KO | 0.411 | 0.234 |
| PE35_KO | 0.945 | 0.335 |
| PPE68_KO | 1.037 | 1.241 |
| glycerol2 | 2.159 | 0.154 |
| lignocerate | -1.218 | 0.024 |
| oleate | -0.651 | -0.295 |
| phosphatidylcholine | -0.774 | 0.567 |
| acetate | -0.111 | -0.263 |
| glucAc | -0.785 | -0.264 |
| Rv0950ko | -0.142 | 0.645 |
| Rv1096ko | -1.731 | 0.799 |
| Rv3684ko | -2.473 | -0.236 |
| delta_otsA_trehalose | 0.002 | 1.439 |