Top 10 genes with highest correlation to Rv1824/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0012/- | (cc=0.7483) | info on Rv0012/- |
| Rv1823/- | (cc=0.7407) | info on Rv1823/- |
| Rv1825/- | (cc=0.6987) | info on Rv1825/- |
| Rv2091c/- | (cc=0.6601) | info on Rv2091c/- |
| Rv2467/pepN | (cc=0.6432) | info on Rv2467/pepN |
| Rv3586/- | (cc=0.6161) | info on Rv3586/- |
| Rv2203/- | (cc=0.608) | info on Rv2203/- |
| Rv2733c/- | (cc=0.6038) | info on Rv2733c/- |
| Rv1331/- | (cc=0.5948) | info on Rv1331/- |
| Rv2171/lppM | (cc=0.5926) | info on Rv2171/lppM |
Correlation of Rv1824/- with Rv2467/pepN
Normalized LFCs for Rv1824/-:
(description and provenance of datasets)
| Rv1824/- | Rv2467/pepN | |
| Fe_supp_jason_reseq | 2.671 | 3.498 |
| low_pH_jason_reseq | 1.377 | 0.831 |
| NO_jason_reseq | 0.788 | -1.016 |
| B6_jason_reseq | 0.607 | -0.311 |
| MHCII_jason_reseq | 1.132 | 1.018 |
| Isoniazid02 | -0.274 | -0.077 |
| Rifampicin4 | -2.185 | -0.915 |
| Ethambutol3 | -1.366 | 0.18 |
| Meropenem3 | -1.095 | 0.049 |
| Vancomycin16 | -3.526 | -0.17 |
| Rv2680_day32 | -0.131 | -0.75 |
| H37Rv_KO_MarP | 6.0 | 0.388 |
| hypoxia_3wks | -2.269 | -1.017 |
| hypoxia_6wks | -2.827 | -1.432 |
| glycerol | 0.341 | 1.006 |
| cholesterol | -1.129 | 1.421 |
| AJ | -2.403 | -0.482 |
| Bibs02 | -1.191 | -0.55 |
| Bibs02c | -0.876 | 0.674 |
| BL6 | -1.45 | -1.549 |
| BL6a | -0.96 | 0.218 |
| BXD01 | -2.453 | -1.286 |
| BXD010 | -2.913 | -1.363 |
| BXD011 | -1.859 | -0.886 |
| BXD03 | -2.84 | -0.487 |
| BXD04 | -2.813 | -0.896 |
| BXD05 | -2.723 | -1.38 |
| BXD06 | -2.803 | -1.368 |
| BXD07 | -2.359 | -0.888 |
| BXD08 | -3.158 | -0.622 |
| BXD09 | -2.394 | -1.614 |
| CAST | -3.924 | -1.602 |
| CCcont | 1.168 | 0.399 |
| DS01 | -2.897 | -1.389 |
| DS02 | -2.521 | -1.843 |
| DS04 | -0.94 | -1.844 |
| DS0c | -0.247 | -0.781 |
| GP01 | -2.073 | -0.278 |
| GP02 | -1.976 | -0.063 |
| GP0c | -2.84 | -1.437 |
| NOD | -3.279 | -1.266 |
| NZO | -2.744 | -1.075 |
| PWK | -3.969 | -1.662 |
| H37Rv_KO_CtpC | -1.026 | 0.36 |
| H37Rv_KO_CtpD | -1.35 | -0.309 |
| H37Rv_KO_Rv1272 | 0.225 | 0.0 |
| H37Rv_KO_SugABC | -2.163 | -0.206 |
| H37Rv_KO_MbtN | -1.756 | -0.015 |
| Trans05 | 0.121 | -1.558 |
| macrophage_unactivated | 0.129 | 0.511 |
| IL1 | -0.519 | 0.481 |
| Rapamycin | 0.7 | 0.307 |
| Tcell | -0.277 | 0.821 |
| GMCSF | -1.769 | -0.38 |
| IFNab | -1.645 | -0.671 |
| IFNg | -1.147 | 0.179 |
| IFNg_GMCSF1 | -2.105 | 0.0 |
| Rv1432_day32 | -2.726 | 0.687 |
| Rv1565c_day32 | 0.49 | 0.261 |
| secA2_input | 1.509 | 0.573 |
| delta_Rv3594 | 1.576 | 2.216 |
| delta_Rv3717 | -0.522 | 0.784 |
| delta_Rv3811 | 0.311 | 1.785 |
| delta_Rv0954 | -0.699 | 0.364 |
| PonA1 | 0.211 | 0.044 |
| EccD1_KO | 0.678 | 0.99 |
| EspI_KO | 0.0 | 1.095 |
| PE35_KO | 2.438 | 1.286 |
| PPE68_KO | 1.801 | 1.725 |
| glycerol2 | -4.161 | -0.178 |
| lignocerate | -1.458 | -0.564 |
| oleate | -5.464 | -1.598 |
| phosphatidylcholine | -0.416 | -0.241 |
| acetate | 0.625 | 0.46 |
| glucAc | 0.656 | 0.295 |
| Rv0950ko | -0.344 | 0.103 |
| Rv1096ko | -3.308 | 0.202 |
| Rv3684ko | -1.159 | 1.159 |
| delta_otsA_trehalose | -0.329 | 0.437 |