Top 10 genes with highest correlation to Rv1817/-:
update plot | correlation | link to info on gene |
---|---|---|
Rv2113/- | (cc=0.8479) | info on Rv2113/- |
Rv0453/PPE11 | (cc=0.8091) | info on Rv0453/PPE11 |
Rv2848c/cobB | (cc=0.7965) | info on Rv2848c/cobB |
Rv2822c/- | (cc=0.7829) | info on Rv2822c/- |
Rv0159c/PE3 | (cc=0.7688) | info on Rv0159c/PE3 |
Rv3815c/- | (cc=0.7673) | info on Rv3815c/- |
Rv3862c/whiB6 | (cc=0.5436) | info on Rv3862c/whiB6 |
Rv2339/mmpL9 | (cc=0.5212) | info on Rv2339/mmpL9 |
Rv3685c/cyp137 | (cc=0.5029) | info on Rv3685c/cyp137 |
Rv2389c/rpfD | (cc=0.5017) | info on Rv2389c/rpfD |
Correlation of Rv1817/- with Rv2339/mmpL9
Normalized LFCs for Rv1817/-:
(description and provenance of datasets)
Rv1817/- | Rv2339/mmpL9 | |
Fe_supp_jason_reseq | -0.223 | 0.283 |
low_pH_jason_reseq | -0.388 | -0.164 |
NO_jason_reseq | -0.714 | -0.349 |
B6_jason_reseq | -0.232 | -0.289 |
MHCII_jason_reseq | 0.326 | 0.481 |
Isoniazid02 | 0.215 | 0.375 |
Rifampicin4 | 0.0 | 0.0 |
Ethambutol3 | 0.612 | 0.568 |
Meropenem3 | 0.316 | -0.052 |
Vancomycin16 | -0.04 | 0.146 |
Rv2680_day32 | -0.437 | 0.365 |
H37Rv_KO_MarP | -0.186 | 0.047 |
hypoxia_3wks | 0.116 | 0.267 |
hypoxia_6wks | -0.203 | -0.177 |
glycerol | 0.604 | -0.426 |
cholesterol | 0.241 | -0.305 |
AJ | -0.311 | 0.247 |
Bibs02 | 0.738 | -0.127 |
Bibs02c | 0.358 | -0.276 |
BL6 | -0.327 | 0.196 |
BL6a | -0.133 | 0.211 |
BXD01 | 0.177 | 0.253 |
BXD010 | -0.209 | 0.557 |
BXD011 | 0.092 | 0.394 |
BXD03 | -0.113 | 0.36 |
BXD04 | -0.103 | 0.565 |
BXD05 | -0.219 | 0.615 |
BXD06 | 0.007 | 0.413 |
BXD07 | -0.344 | 0.295 |
BXD08 | 0.091 | 0.087 |
BXD09 | -0.331 | 0.41 |
CAST | 0.22 | 0.404 |
CCcont | -0.371 | -0.197 |
DS01 | 0.453 | 0.154 |
DS02 | 0.334 | -0.126 |
DS04 | 0.332 | 0.6 |
DS0c | 0.409 | 0.578 |
GP01 | -0.077 | 0.591 |
GP02 | 0.301 | 0.138 |
GP0c | -0.088 | 0.057 |
NOD | 0.441 | 1.289 |
NZO | 0.069 | 0.35 |
PWK | 0.068 | 0.47 |
H37Rv_KO_CtpC | 0.111 | 0.488 |
H37Rv_KO_CtpD | 0.178 | 0.668 |
H37Rv_KO_Rv1272 | 1.0 | 1.099 |
H37Rv_KO_SugABC | -0.144 | 0.751 |
H37Rv_KO_MbtN | 0.43 | 0.571 |
Trans05 | 1.011 | 1.072 |
macrophage_unactivated | 1.588 | 0.42 |
IL1 | 2.201 | 0.611 |
Rapamycin | 2.317 | 0.724 |
Tcell | -4.923 | -0.648 |
GMCSF | 2.26 | 1.225 |
IFNab | 1.886 | 0.801 |
IFNg | 2.397 | 1.056 |
IFNg_GMCSF1 | 2.385 | 0.55 |
Rv1432_day32 | 0.096 | 0.576 |
Rv1565c_day32 | -0.156 | 0.3 |
secA2_input | -0.434 | -0.631 |
delta_Rv3594 | 0.0 | -0.072 |
delta_Rv3717 | -0.028 | 0.0 |
delta_Rv3811 | 0.28 | 0.046 |
delta_Rv0954 | 0.142 | 0.079 |
PonA1 | -0.059 | -0.293 |
EccD1_KO | 0.687 | -0.046 |
EspI_KO | 0.359 | -0.168 |
PE35_KO | 0.63 | 0.166 |
PPE68_KO | 0.56 | 0.355 |
glycerol2 | 0.085 | 0.0 |
lignocerate | -0.069 | 0.339 |
oleate | 0.386 | 0.081 |
phosphatidylcholine | 0.239 | 0.231 |
acetate | -0.156 | -0.048 |
glucAc | -0.167 | -0.227 |
Rv0950ko | 0.13 | 0.121 |
Rv1096ko | -0.392 | -1.095 |
Rv3684ko | -0.102 | -0.223 |
delta_otsA_trehalose | -0.085 | -0.557 |