Top 10 genes with highest correlation to Rv1806/PE20:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0526/- | (cc=0.5648) | info on Rv0526/- |
| Rv2673/aftC | (cc=0.5458) | info on Rv2673/aftC |
| Rv0150c/- | (cc=0.5116) | info on Rv0150c/- |
| Rv1982A/vapB36 | (cc=0.5115) | info on Rv1982A/vapB36 |
| Rv2270/lppN | (cc=0.5053) | info on Rv2270/lppN |
| Rv2290/lppO | (cc=0.5039) | info on Rv2290/lppO |
| Rv0078/- | (cc=0.4846) | info on Rv0078/- |
| Rv2169c/- | (cc=0.4814) | info on Rv2169c/- |
| Rv0750/- | (cc=0.4695) | info on Rv0750/- |
| Rv2985/mutT1 | (cc=0.4625) | info on Rv2985/mutT1 |
Correlation of Rv1806/PE20 with Rv1982A/vapB36
Normalized LFCs for Rv1806/PE20:
(description and provenance of datasets)
| Rv1806/PE20 | Rv1982A/vapB36 | |
| Fe_supp_jason_reseq | 0.115 | -0.066 |
| low_pH_jason_reseq | -0.231 | -0.338 |
| NO_jason_reseq | -0.307 | -1.221 |
| B6_jason_reseq | -1.801 | -0.334 |
| MHCII_jason_reseq | -2.743 | -2.353 |
| Isoniazid02 | 0.263 | -0.112 |
| Rifampicin4 | -0.983 | 0.322 |
| Ethambutol3 | -0.163 | -0.652 |
| Meropenem3 | 0.0 | -0.156 |
| Vancomycin16 | -0.085 | 0.0 |
| Rv2680_day32 | 0.131 | -0.476 |
| H37Rv_KO_MarP | 0.072 | -0.219 |
| hypoxia_3wks | -0.327 | -0.929 |
| hypoxia_6wks | -0.979 | 0.299 |
| glycerol | 1.287 | 0.149 |
| cholesterol | 1.834 | 1.618 |
| AJ | 0.0 | -0.896 |
| Bibs02 | -1.568 | -3.315 |
| Bibs02c | 2.872 | 1.685 |
| BL6 | 1.825 | -0.456 |
| BL6a | 2.581 | 1.175 |
| BXD01 | -0.113 | -0.793 |
| BXD010 | -1.227 | 0.644 |
| BXD011 | -0.17 | -1.698 |
| BXD03 | 1.901 | -0.786 |
| BXD04 | 0.788 | -0.623 |
| BXD05 | 1.322 | 0.81 |
| BXD06 | 0.0 | -0.926 |
| BXD07 | 0.606 | -0.065 |
| BXD08 | -0.71 | -0.884 |
| BXD09 | -0.403 | -0.452 |
| CAST | 2.546 | -0.889 |
| CCcont | -1.02 | -1.761 |
| DS01 | -1.432 | -2.676 |
| DS02 | -0.093 | -2.017 |
| DS04 | -1.858 | -0.358 |
| DS0c | -0.622 | 0.251 |
| GP01 | 1.792 | -1.707 |
| GP02 | -0.714 | -0.87 |
| GP0c | -0.237 | -2.054 |
| NOD | 0.983 | -0.97 |
| NZO | -0.173 | -0.727 |
| PWK | 0.232 | -0.223 |
| H37Rv_KO_CtpC | 2.337 | -0.859 |
| H37Rv_KO_CtpD | -1.086 | -1.915 |
| H37Rv_KO_Rv1272 | -1.21 | -1.663 |
| H37Rv_KO_SugABC | -0.85 | 0.517 |
| H37Rv_KO_MbtN | 0.68 | 0.547 |
| Trans05 | 1.906 | 0.996 |
| macrophage_unactivated | -0.114 | 0.0 |
| IL1 | -0.801 | -3.776 |
| Rapamycin | 0.967 | 0.365 |
| Tcell | 0.932 | -1.518 |
| GMCSF | -1.885 | -1.611 |
| IFNab | -1.986 | 0.496 |
| IFNg | 1.777 | 0.556 |
| IFNg_GMCSF1 | -0.226 | -0.496 |
| Rv1432_day32 | 0.0 | -1.918 |
| Rv1565c_day32 | -0.54 | 0.0 |
| secA2_input | -3.397 | -0.412 |
| delta_Rv3594 | 0.635 | 3.292 |
| delta_Rv3717 | 0.445 | 0.365 |
| delta_Rv3811 | 0.226 | 1.603 |
| delta_Rv0954 | 2.013 | 1.942 |
| PonA1 | -0.979 | -0.979 |
| EccD1_KO | 2.424 | 0.937 |
| EspI_KO | 1.184 | 0.359 |
| PE35_KO | 2.508 | -0.753 |
| PPE68_KO | 1.929 | 0.166 |
| glycerol2 | -2.347 | -2.221 |
| lignocerate | -3.065 | -1.846 |
| oleate | -1.708 | -1.723 |
| phosphatidylcholine | -2.979 | -1.86 |
| acetate | -2.44 | -1.887 |
| glucAc | -3.489 | -2.207 |
| Rv0950ko | 1.282 | -0.081 |
| Rv1096ko | 0.124 | -0.808 |
| Rv3684ko | 0.747 | 0.344 |
| delta_otsA_trehalose | 0.564 | 0.807 |