Top 10 genes with highest correlation to Rv1791/PE19:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1793/esxN | (cc=0.5789) | info on Rv1793/esxN |
| Rv2583c/relA | (cc=0.5737) | info on Rv2583c/relA |
| Rv1798/eccA5 | (cc=0.5343) | info on Rv1798/eccA5 |
| Rv0119/fadD7 | (cc=0.5203) | info on Rv0119/fadD7 |
| Rv3483c/- | (cc=0.4739) | info on Rv3483c/- |
| Rv3370c/dnaE2 | (cc=0.4656) | info on Rv3370c/dnaE2 |
| Rv1569/bioF1 | (cc=0.4581) | info on Rv1569/bioF1 |
| Rv3866/espG1 | (cc=0.4484) | info on Rv3866/espG1 |
| Rv1790/PPE27 | (cc=0.4377) | info on Rv1790/PPE27 |
| Rv1065/- | (cc=0.4366) | info on Rv1065/- |
Correlation of Rv1791/PE19 with Rv1569/bioF1
Normalized LFCs for Rv1791/PE19:
(description and provenance of datasets)
| Rv1791/PE19 | Rv1569/bioF1 | |
| Fe_supp_jason_reseq | -0.134 | 1.1 |
| low_pH_jason_reseq | -0.07 | 1.042 |
| NO_jason_reseq | 2.515 | 0.612 |
| B6_jason_reseq | -3.115 | -3.205 |
| MHCII_jason_reseq | -2.374 | -2.159 |
| Isoniazid02 | 6.0 | 0.533 |
| Rifampicin4 | -1.004 | 0.56 |
| Ethambutol3 | 2.723 | 1.251 |
| Meropenem3 | 6.0 | 2.153 |
| Vancomycin16 | -3.39 | -0.287 |
| Rv2680_day32 | -0.249 | -4.081 |
| H37Rv_KO_MarP | 1.823 | -0.133 |
| hypoxia_3wks | -2.727 | -0.49 |
| hypoxia_6wks | -4.232 | -1.731 |
| glycerol | -1.017 | -4.463 |
| cholesterol | -1.853 | -3.71 |
| AJ | -2.526 | -5.943 |
| Bibs02 | -2.339 | -4.684 |
| Bibs02c | -2.102 | -5.359 |
| BL6 | -1.6 | -3.204 |
| BL6a | -0.722 | -4.531 |
| BXD01 | -0.866 | -3.336 |
| BXD010 | -1.51 | -3.281 |
| BXD011 | -0.641 | -2.815 |
| BXD03 | -0.493 | -3.464 |
| BXD04 | -1.243 | -3.168 |
| BXD05 | -0.49 | -2.877 |
| BXD06 | -1.238 | -3.419 |
| BXD07 | -1.508 | -3.547 |
| BXD08 | -1.702 | -2.079 |
| BXD09 | -1.798 | -3.6 |
| CAST | -2.508 | -3.792 |
| CCcont | 2.734 | 0.26 |
| DS01 | -3.022 | -6.0 |
| DS02 | -1.861 | -5.571 |
| DS04 | -0.977 | -3.195 |
| DS0c | -2.775 | -5.556 |
| GP01 | 2.594 | -1.923 |
| GP02 | 3.204 | -1.779 |
| GP0c | 2.968 | 1.55 |
| NOD | -2.874 | -4.013 |
| NZO | -2.552 | -5.109 |
| PWK | -0.715 | -4.651 |
| H37Rv_KO_CtpC | -0.818 | -3.363 |
| H37Rv_KO_CtpD | -0.518 | -1.93 |
| H37Rv_KO_Rv1272 | -1.535 | -3.612 |
| H37Rv_KO_SugABC | 0.03 | -1.509 |
| H37Rv_KO_MbtN | 1.428 | -0.692 |
| Trans05 | -0.947 | -3.217 |
| macrophage_unactivated | -1.13 | 2.108 |
| IL1 | 0.762 | -1.21 |
| Rapamycin | -0.11 | 0.35 |
| Tcell | 1.867 | 1.336 |
| GMCSF | -0.095 | 1.893 |
| IFNab | -0.447 | 2.095 |
| IFNg | -0.396 | -0.216 |
| IFNg_GMCSF1 | -0.591 | -2.614 |
| Rv1432_day32 | -2.568 | -1.304 |
| Rv1565c_day32 | -0.766 | -5.178 |
| secA2_input | 1.493 | 0.441 |
| delta_Rv3594 | -0.821 | 0.277 |
| delta_Rv3717 | 0.018 | 0.653 |
| delta_Rv3811 | -0.418 | -1.096 |
| delta_Rv0954 | 0.226 | 0.939 |
| PonA1 | -4.903 | 0.379 |
| EccD1_KO | -3.772 | 0.033 |
| EspI_KO | -5.136 | -1.492 |
| PE35_KO | -4.466 | -1.173 |
| PPE68_KO | -1.27 | -1.456 |
| glycerol2 | 1.77 | -0.68 |
| lignocerate | 0.0 | 0.537 |
| oleate | 0.537 | -0.688 |
| phosphatidylcholine | 1.188 | 0.27 |
| acetate | 1.539 | -0.369 |
| glucAc | 0.605 | -0.501 |
| Rv0950ko | 0.938 | -0.724 |
| Rv1096ko | -2.268 | 0.335 |
| Rv3684ko | -1.028 | -0.547 |
| delta_otsA_trehalose | 0.878 | 0.424 |