Top 10 genes with highest correlation to Rv1791/PE19:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1793/esxN | (cc=0.5789) | info on Rv1793/esxN |
| Rv2583c/relA | (cc=0.5737) | info on Rv2583c/relA |
| Rv1798/eccA5 | (cc=0.5343) | info on Rv1798/eccA5 |
| Rv0119/fadD7 | (cc=0.5203) | info on Rv0119/fadD7 |
| Rv3483c/- | (cc=0.4739) | info on Rv3483c/- |
| Rv3370c/dnaE2 | (cc=0.4656) | info on Rv3370c/dnaE2 |
| Rv1569/bioF1 | (cc=0.4581) | info on Rv1569/bioF1 |
| Rv3866/espG1 | (cc=0.4484) | info on Rv3866/espG1 |
| Rv1790/PPE27 | (cc=0.4377) | info on Rv1790/PPE27 |
| Rv1065/- | (cc=0.4366) | info on Rv1065/- |
Correlation of Rv1791/PE19 with Rv1065/-
Normalized LFCs for Rv1791/PE19:
(description and provenance of datasets)
| Rv1791/PE19 | Rv1065/- | |
| Fe_supp_jason_reseq | -0.134 | -0.085 |
| low_pH_jason_reseq | -0.07 | -0.773 |
| NO_jason_reseq | 2.515 | -0.16 |
| B6_jason_reseq | -3.115 | -3.079 |
| MHCII_jason_reseq | -2.374 | -2.083 |
| Isoniazid02 | 6.0 | -0.007 |
| Rifampicin4 | -1.004 | 0.014 |
| Ethambutol3 | 2.723 | 1.204 |
| Meropenem3 | 6.0 | 0.272 |
| Vancomycin16 | -3.39 | -0.167 |
| Rv2680_day32 | -0.249 | -0.561 |
| H37Rv_KO_MarP | 1.823 | 0.113 |
| hypoxia_3wks | -2.727 | 0.191 |
| hypoxia_6wks | -4.232 | -0.228 |
| glycerol | -1.017 | 0.268 |
| cholesterol | -1.853 | -1.007 |
| AJ | -2.526 | -1.382 |
| Bibs02 | -2.339 | -2.387 |
| Bibs02c | -2.102 | -2.102 |
| BL6 | -1.6 | -0.413 |
| BL6a | -0.722 | -1.652 |
| BXD01 | -0.866 | -1.005 |
| BXD010 | -1.51 | -1.373 |
| BXD011 | -0.641 | -0.676 |
| BXD03 | -0.493 | -0.576 |
| BXD04 | -1.243 | -0.736 |
| BXD05 | -0.49 | -0.852 |
| BXD06 | -1.238 | -1.101 |
| BXD07 | -1.508 | -1.261 |
| BXD08 | -1.702 | -1.365 |
| BXD09 | -1.798 | -1.239 |
| CAST | -2.508 | -2.364 |
| CCcont | 2.734 | -0.674 |
| DS01 | -3.022 | -3.374 |
| DS02 | -1.861 | -1.344 |
| DS04 | -0.977 | -3.485 |
| DS0c | -2.775 | -2.863 |
| GP01 | 2.594 | 0.052 |
| GP02 | 3.204 | 0.431 |
| GP0c | 2.968 | 0.084 |
| NOD | -2.874 | -2.184 |
| NZO | -2.552 | -0.825 |
| PWK | -0.715 | -1.272 |
| H37Rv_KO_CtpC | -0.818 | -0.967 |
| H37Rv_KO_CtpD | -0.518 | -0.999 |
| H37Rv_KO_Rv1272 | -1.535 | -0.61 |
| H37Rv_KO_SugABC | 0.03 | -0.705 |
| H37Rv_KO_MbtN | 1.428 | -0.452 |
| Trans05 | -0.947 | -0.416 |
| macrophage_unactivated | -1.13 | -0.533 |
| IL1 | 0.762 | -0.786 |
| Rapamycin | -0.11 | -0.055 |
| Tcell | 1.867 | -0.485 |
| GMCSF | -0.095 | 0.591 |
| IFNab | -0.447 | -0.354 |
| IFNg | -0.396 | -0.69 |
| IFNg_GMCSF1 | -0.591 | -0.386 |
| Rv1432_day32 | -2.568 | -1.091 |
| Rv1565c_day32 | -0.766 | -0.834 |
| secA2_input | 1.493 | 1.032 |
| delta_Rv3594 | -0.821 | -1.017 |
| delta_Rv3717 | 0.018 | -0.296 |
| delta_Rv3811 | -0.418 | -0.219 |
| delta_Rv0954 | 0.226 | -1.353 |
| PonA1 | -4.903 | -0.3 |
| EccD1_KO | -3.772 | -0.25 |
| EspI_KO | -5.136 | 0.043 |
| PE35_KO | -4.466 | -0.292 |
| PPE68_KO | -1.27 | -0.144 |
| glycerol2 | 1.77 | -0.149 |
| lignocerate | 0.0 | -0.032 |
| oleate | 0.537 | 0.128 |
| phosphatidylcholine | 1.188 | 0.455 |
| acetate | 1.539 | 0.0 |
| glucAc | 0.605 | -0.187 |
| Rv0950ko | 0.938 | -0.087 |
| Rv1096ko | -2.268 | 0.169 |
| Rv3684ko | -1.028 | 0.069 |
| delta_otsA_trehalose | 0.878 | -0.524 |