Top 10 genes with highest correlation to Rv1775/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3401/- | (cc=0.5665) | info on Rv3401/- |
| Rv2232/ptkA | (cc=0.5222) | info on Rv2232/ptkA |
| Rv3367/PE_PGRS51 | (cc=0.5219) | info on Rv3367/PE_PGRS51 |
| Rv2670c/- | (cc=0.5155) | info on Rv2670c/- |
| Rv2559c/- | (cc=0.5144) | info on Rv2559c/- |
| Rv0901/- | (cc=0.5066) | info on Rv0901/- |
| Rv3635/- | (cc=0.5049) | info on Rv3635/- |
| Rv2826c/- | (cc=0.4945) | info on Rv2826c/- |
| Rv0992c/- | (cc=0.4856) | info on Rv0992c/- |
| Rv2487c/PE_PGRS42 | (cc=0.4799) | info on Rv2487c/PE_PGRS42 |
Correlation of Rv1775/- with Rv3401/-
Normalized LFCs for Rv1775/-:
(description and provenance of datasets)
| Rv1775/- | Rv3401/- | |
| Fe_supp_jason_reseq | -0.074 | 0.0 |
| low_pH_jason_reseq | 0.077 | -0.659 |
| NO_jason_reseq | 1.958 | -0.026 |
| B6_jason_reseq | 1.003 | 0.695 |
| MHCII_jason_reseq | 1.46 | 0.952 |
| Isoniazid02 | 0.774 | 0.383 |
| Rifampicin4 | 0.084 | 0.244 |
| Ethambutol3 | 0.537 | 0.72 |
| Meropenem3 | 3.173 | 1.518 |
| Vancomycin16 | 0.395 | -0.082 |
| Rv2680_day32 | 1.615 | 1.336 |
| H37Rv_KO_MarP | 0.047 | 0.23 |
| hypoxia_3wks | -0.247 | -0.068 |
| hypoxia_6wks | 0.205 | -0.035 |
| glycerol | 1.973 | -0.053 |
| cholesterol | 0.317 | 1.523 |
| AJ | -0.397 | -0.131 |
| Bibs02 | 1.163 | 0.567 |
| Bibs02c | 0.499 | -0.156 |
| BL6 | -1.067 | -0.906 |
| BL6a | -0.202 | -0.97 |
| BXD01 | -0.912 | -0.89 |
| BXD010 | -0.131 | -0.854 |
| BXD011 | -0.805 | -0.556 |
| BXD03 | -0.251 | -0.564 |
| BXD04 | -1.162 | -0.606 |
| BXD05 | -0.911 | -0.793 |
| BXD06 | -1.0 | -1.097 |
| BXD07 | -0.647 | -0.687 |
| BXD08 | -0.41 | -0.624 |
| BXD09 | -0.856 | -0.892 |
| CAST | -0.057 | 0.269 |
| CCcont | -0.816 | -1.095 |
| DS01 | -0.087 | 0.548 |
| DS02 | -0.372 | 0.421 |
| DS04 | 0.884 | 0.602 |
| DS0c | -0.5 | 0.404 |
| GP01 | -0.461 | 0.349 |
| GP02 | 1.066 | 0.307 |
| GP0c | 0.091 | -0.109 |
| NOD | 0.556 | 0.906 |
| NZO | 0.048 | -0.205 |
| PWK | -0.88 | -0.354 |
| H37Rv_KO_CtpC | 0.876 | -0.54 |
| H37Rv_KO_CtpD | -1.533 | 0.537 |
| H37Rv_KO_Rv1272 | 0.598 | -0.305 |
| H37Rv_KO_SugABC | -1.366 | -0.478 |
| H37Rv_KO_MbtN | 1.432 | -0.036 |
| Trans05 | -0.081 | 0.384 |
| macrophage_unactivated | -2.045 | -0.925 |
| IL1 | -0.43 | -0.97 |
| Rapamycin | -1.433 | -0.829 |
| Tcell | 0.244 | -0.671 |
| GMCSF | -2.482 | -0.57 |
| IFNab | -0.339 | -1.022 |
| IFNg | -0.342 | -0.123 |
| IFNg_GMCSF1 | 0.189 | 0.251 |
| Rv1432_day32 | 0.541 | 0.757 |
| Rv1565c_day32 | 0.289 | 0.763 |
| secA2_input | -0.59 | 0.261 |
| delta_Rv3594 | -0.133 | -0.223 |
| delta_Rv3717 | -0.091 | -0.227 |
| delta_Rv3811 | 0.327 | -0.235 |
| delta_Rv0954 | -0.946 | 0.088 |
| PonA1 | -0.1 | 0.323 |
| EccD1_KO | -0.691 | -0.033 |
| EspI_KO | -0.55 | -0.086 |
| PE35_KO | 0.213 | -0.146 |
| PPE68_KO | 0.234 | -0.16 |
| glycerol2 | -0.942 | 0.083 |
| lignocerate | -1.294 | -0.571 |
| oleate | -0.089 | -0.647 |
| phosphatidylcholine | -0.179 | -0.13 |
| acetate | -0.997 | -0.191 |
| glucAc | -1.754 | -0.389 |
| Rv0950ko | -0.292 | 0.093 |
| Rv1096ko | 1.746 | 0.184 |
| Rv3684ko | 0.891 | -0.105 |
| delta_otsA_trehalose | 0.404 | 0.465 |