Top 10 genes with highest correlation to Rv1760/-:
update plot | correlation | link to info on gene |
---|---|---|
Rv2351c/plcA | (cc=0.5895) | info on Rv2351c/plcA |
Rv2025c/- | (cc=0.5707) | info on Rv2025c/- |
Rv3784/- | (cc=0.5178) | info on Rv3784/- |
Rv1527c/pks5 | (cc=0.4985) | info on Rv1527c/pks5 |
Rv3294c/- | (cc=0.4861) | info on Rv3294c/- |
Rv0336/- | (cc=0.4703) | info on Rv0336/- |
Rv1618/tesB1 | (cc=0.4698) | info on Rv1618/tesB1 |
Rv3367/PE_PGRS51 | (cc=0.459) | info on Rv3367/PE_PGRS51 |
Rv2443/dctA | (cc=0.4576) | info on Rv2443/dctA |
Rv1425/- | (cc=0.4574) | info on Rv1425/- |
Correlation of Rv1760/- with Rv1425/-
Normalized LFCs for Rv1760/-:
(description and provenance of datasets)
Rv1760/- | Rv1425/- | |
Fe_supp_jason_reseq | 0.36 | 0.054 |
low_pH_jason_reseq | -1.173 | -0.119 |
NO_jason_reseq | 0.333 | -0.168 |
B6_jason_reseq | 0.16 | 0.634 |
MHCII_jason_reseq | 0.248 | 0.73 |
Isoniazid02 | 0.278 | 1.234 |
Rifampicin4 | 0.016 | -0.087 |
Ethambutol3 | 0.28 | 0.061 |
Meropenem3 | 1.035 | 0.817 |
Vancomycin16 | 0.119 | 0.085 |
Rv2680_day32 | -0.408 | 0.043 |
H37Rv_KO_MarP | -0.141 | 0.236 |
hypoxia_3wks | -0.064 | -0.263 |
hypoxia_6wks | 0.098 | -0.56 |
glycerol | 0.176 | -0.591 |
cholesterol | 0.434 | 0.012 |
AJ | 0.745 | 0.123 |
Bibs02 | 0.065 | -0.11 |
Bibs02c | -0.07 | -0.27 |
BL6 | 0.0 | -0.246 |
BL6a | -0.195 | -0.775 |
BXD01 | 0.028 | 0.297 |
BXD010 | -0.168 | -0.432 |
BXD011 | 0.041 | -0.176 |
BXD03 | -0.245 | -0.488 |
BXD04 | 0.044 | 0.021 |
BXD05 | -0.117 | -0.328 |
BXD06 | -0.196 | 0.039 |
BXD07 | -0.306 | -0.152 |
BXD08 | 0.298 | 0.163 |
BXD09 | -0.189 | -0.395 |
CAST | 0.405 | -0.489 |
CCcont | -0.106 | -0.25 |
DS01 | 0.252 | 0.05 |
DS02 | 0.153 | 0.46 |
DS04 | -0.056 | 0.416 |
DS0c | 0.159 | 0.09 |
GP01 | 0.953 | -0.038 |
GP02 | 1.058 | 1.025 |
GP0c | 0.478 | -0.199 |
NOD | 0.849 | 0.163 |
NZO | 0.63 | 0.295 |
PWK | 0.529 | 0.276 |
H37Rv_KO_CtpC | 0.162 | -0.328 |
H37Rv_KO_CtpD | 0.262 | 0.169 |
H37Rv_KO_Rv1272 | 0.751 | 0.747 |
H37Rv_KO_SugABC | -0.21 | -0.2 |
H37Rv_KO_MbtN | 0.494 | -0.224 |
Trans05 | 0.36 | 0.532 |
macrophage_unactivated | 0.271 | -0.107 |
IL1 | -0.347 | -0.05 |
Rapamycin | -0.457 | 0.276 |
Tcell | -0.339 | -0.14 |
GMCSF | -0.032 | 0.045 |
IFNab | -0.472 | -0.348 |
IFNg | 0.0 | -0.233 |
IFNg_GMCSF1 | 0.83 | -0.135 |
Rv1432_day32 | 0.082 | 0.0 |
Rv1565c_day32 | -0.125 | 0.377 |
secA2_input | -0.18 | -0.027 |
delta_Rv3594 | -0.067 | -0.119 |
delta_Rv3717 | 0.006 | -0.395 |
delta_Rv3811 | 0.071 | -0.412 |
delta_Rv0954 | 0.317 | 0.58 |
PonA1 | 0.15 | -0.488 |
EccD1_KO | -0.622 | -0.526 |
EspI_KO | -0.716 | -0.753 |
PE35_KO | -0.365 | -0.312 |
PPE68_KO | -0.301 | -1.008 |
glycerol2 | 0.391 | 0.996 |
lignocerate | 0.592 | 1.223 |
oleate | 0.285 | 0.896 |
phosphatidylcholine | 0.609 | 1.389 |
acetate | -0.101 | 0.68 |
glucAc | 0.213 | 0.474 |
Rv0950ko | 0.467 | -0.277 |
Rv1096ko | -0.106 | -0.229 |
Rv3684ko | 0.151 | -0.098 |
delta_otsA_trehalose | 0.432 | -0.628 |