Top 10 genes with highest correlation to Rv1760/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2351c/plcA | (cc=0.5895) | info on Rv2351c/plcA |
| Rv2025c/- | (cc=0.5707) | info on Rv2025c/- |
| Rv3784/- | (cc=0.5178) | info on Rv3784/- |
| Rv1527c/pks5 | (cc=0.4985) | info on Rv1527c/pks5 |
| Rv3294c/- | (cc=0.4861) | info on Rv3294c/- |
| Rv0336/- | (cc=0.4703) | info on Rv0336/- |
| Rv1618/tesB1 | (cc=0.4698) | info on Rv1618/tesB1 |
| Rv3367/PE_PGRS51 | (cc=0.459) | info on Rv3367/PE_PGRS51 |
| Rv2443/dctA | (cc=0.4576) | info on Rv2443/dctA |
| Rv1425/- | (cc=0.4574) | info on Rv1425/- |
Correlation of Rv1760/- with Rv2351c/plcA
Normalized LFCs for Rv1760/-:
(description and provenance of datasets)
| Rv1760/- | Rv2351c/plcA | |
| Fe_supp_jason_reseq | 0.36 | 0.699 |
| low_pH_jason_reseq | -1.173 | -1.404 |
| NO_jason_reseq | 0.333 | -0.097 |
| B6_jason_reseq | 0.16 | 0.563 |
| MHCII_jason_reseq | 0.248 | 0.412 |
| Isoniazid02 | 0.278 | 0.026 |
| Rifampicin4 | 0.016 | 0.108 |
| Ethambutol3 | 0.28 | 0.972 |
| Meropenem3 | 1.035 | 0.4 |
| Vancomycin16 | 0.119 | -0.252 |
| Rv2680_day32 | -0.408 | -0.164 |
| H37Rv_KO_MarP | -0.141 | -0.087 |
| hypoxia_3wks | -0.064 | -0.116 |
| hypoxia_6wks | 0.098 | -0.008 |
| glycerol | 0.176 | -0.183 |
| cholesterol | 0.434 | -0.153 |
| AJ | 0.745 | -0.096 |
| Bibs02 | 0.065 | 0.142 |
| Bibs02c | -0.07 | 0.227 |
| BL6 | 0.0 | -0.668 |
| BL6a | -0.195 | -0.327 |
| BXD01 | 0.028 | -0.364 |
| BXD010 | -0.168 | -0.452 |
| BXD011 | 0.041 | -0.356 |
| BXD03 | -0.245 | 0.006 |
| BXD04 | 0.044 | -0.627 |
| BXD05 | -0.117 | -0.163 |
| BXD06 | -0.196 | -0.467 |
| BXD07 | -0.306 | -0.537 |
| BXD08 | 0.298 | -0.5 |
| BXD09 | -0.189 | -0.536 |
| CAST | 0.405 | 0.239 |
| CCcont | -0.106 | -0.433 |
| DS01 | 0.252 | -0.005 |
| DS02 | 0.153 | -0.126 |
| DS04 | -0.056 | -0.129 |
| DS0c | 0.159 | 0.009 |
| GP01 | 0.953 | -0.208 |
| GP02 | 1.058 | 0.134 |
| GP0c | 0.478 | -0.215 |
| NOD | 0.849 | 0.443 |
| NZO | 0.63 | 0.315 |
| PWK | 0.529 | 0.234 |
| H37Rv_KO_CtpC | 0.162 | -0.033 |
| H37Rv_KO_CtpD | 0.262 | 0.209 |
| H37Rv_KO_Rv1272 | 0.751 | 0.019 |
| H37Rv_KO_SugABC | -0.21 | 0.002 |
| H37Rv_KO_MbtN | 0.494 | 0.729 |
| Trans05 | 0.36 | -0.348 |
| macrophage_unactivated | 0.271 | -0.448 |
| IL1 | -0.347 | -0.448 |
| Rapamycin | -0.457 | -0.411 |
| Tcell | -0.339 | -0.795 |
| GMCSF | -0.032 | -0.298 |
| IFNab | -0.472 | -0.405 |
| IFNg | 0.0 | 0.083 |
| IFNg_GMCSF1 | 0.83 | 0.405 |
| Rv1432_day32 | 0.082 | -0.116 |
| Rv1565c_day32 | -0.125 | 0.054 |
| secA2_input | -0.18 | -0.346 |
| delta_Rv3594 | -0.067 | 0.164 |
| delta_Rv3717 | 0.006 | -0.073 |
| delta_Rv3811 | 0.071 | 0.052 |
| delta_Rv0954 | 0.317 | 0.176 |
| PonA1 | 0.15 | 0.048 |
| EccD1_KO | -0.622 | -0.214 |
| EspI_KO | -0.716 | -0.553 |
| PE35_KO | -0.365 | -0.525 |
| PPE68_KO | -0.301 | -0.451 |
| glycerol2 | 0.391 | 1.162 |
| lignocerate | 0.592 | 0.964 |
| oleate | 0.285 | 1.297 |
| phosphatidylcholine | 0.609 | 0.957 |
| acetate | -0.101 | 0.16 |
| glucAc | 0.213 | 0.281 |
| Rv0950ko | 0.467 | 0.317 |
| Rv1096ko | -0.106 | -0.561 |
| Rv3684ko | 0.151 | 0.0 |
| delta_otsA_trehalose | 0.432 | -0.197 |