Top 10 genes with highest correlation to Rv1753c/PPE24:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2735c/- | (cc=0.5748) | info on Rv2735c/- |
| Rv0231/fadE4 | (cc=0.5603) | info on Rv0231/fadE4 |
| Rv0831c/- | (cc=0.5408) | info on Rv0831c/- |
| Rv0932c/pstS2 | (cc=0.5397) | info on Rv0932c/pstS2 |
| Rv1724c/- | (cc=0.5376) | info on Rv1724c/- |
| Rv1996/- | (cc=0.5334) | info on Rv1996/- |
| Rv0049/- | (cc=0.527) | info on Rv0049/- |
| Rv1387/PPE20 | (cc=0.5255) | info on Rv1387/PPE20 |
| Rv2430c/PPE41 | (cc=0.5189) | info on Rv2430c/PPE41 |
| Rv1491c/- | (cc=0.516) | info on Rv1491c/- |
Correlation of Rv1753c/PPE24 with Rv1996/-
Normalized LFCs for Rv1753c/PPE24:
(description and provenance of datasets)
| Rv1753c/PPE24 | Rv1996/- | |
| Fe_supp_jason_reseq | -0.481 | -0.134 |
| low_pH_jason_reseq | 0.254 | -0.254 |
| NO_jason_reseq | 0.289 | 0.176 |
| B6_jason_reseq | -0.538 | 0.208 |
| MHCII_jason_reseq | -0.606 | 0.085 |
| Isoniazid02 | -1.612 | -1.052 |
| Rifampicin4 | -0.717 | -0.42 |
| Ethambutol3 | -1.175 | -1.014 |
| Meropenem3 | -0.606 | -0.618 |
| Vancomycin16 | -1.173 | -0.812 |
| Rv2680_day32 | 0.0 | -0.73 |
| H37Rv_KO_MarP | -0.11 | -0.073 |
| hypoxia_3wks | 0.239 | -0.056 |
| hypoxia_6wks | -0.198 | 0.34 |
| glycerol | -0.72 | -0.097 |
| cholesterol | -0.516 | -0.393 |
| AJ | 0.738 | 0.208 |
| Bibs02 | -0.087 | 0.174 |
| Bibs02c | -0.746 | -0.05 |
| BL6 | -0.405 | 0.383 |
| BL6a | 0.377 | 0.482 |
| BXD01 | 0.116 | -0.178 |
| BXD010 | 0.666 | 0.37 |
| BXD011 | 0.981 | 1.465 |
| BXD03 | 0.759 | 1.255 |
| BXD04 | 0.553 | 0.601 |
| BXD05 | 0.56 | 0.664 |
| BXD06 | 0.447 | 0.343 |
| BXD07 | 0.123 | 0.124 |
| BXD08 | 0.146 | 0.235 |
| BXD09 | 0.268 | 0.62 |
| CAST | 0.349 | 0.105 |
| CCcont | -0.532 | -0.08 |
| DS01 | 0.055 | 0.286 |
| DS02 | 0.457 | 0.638 |
| DS04 | 0.617 | 0.62 |
| DS0c | -0.157 | 0.297 |
| GP01 | -0.072 | -0.632 |
| GP02 | 0.694 | -1.583 |
| GP0c | -0.463 | -0.949 |
| NOD | 0.514 | -0.308 |
| NZO | 0.529 | 0.629 |
| PWK | 0.0 | 0.165 |
| H37Rv_KO_CtpC | 0.867 | -0.358 |
| H37Rv_KO_CtpD | -0.676 | -1.134 |
| H37Rv_KO_Rv1272 | 0.565 | 0.527 |
| H37Rv_KO_SugABC | 0.695 | 0.403 |
| H37Rv_KO_MbtN | 1.143 | 0.364 |
| Trans05 | 0.481 | 0.117 |
| macrophage_unactivated | -0.265 | 0.382 |
| IL1 | -0.7 | -0.323 |
| Rapamycin | -0.083 | 0.236 |
| Tcell | -0.088 | -0.283 |
| GMCSF | 0.409 | 0.507 |
| IFNab | -0.432 | -0.263 |
| IFNg | -0.072 | 0.083 |
| IFNg_GMCSF1 | -0.173 | -0.676 |
| Rv1432_day32 | -0.053 | -0.089 |
| Rv1565c_day32 | 0.15 | 0.734 |
| secA2_input | -0.113 | 0.238 |
| delta_Rv3594 | 0.802 | 1.282 |
| delta_Rv3717 | 0.109 | 1.063 |
| delta_Rv3811 | 0.715 | 1.386 |
| delta_Rv0954 | 0.287 | 0.813 |
| PonA1 | -0.389 | 1.343 |
| EccD1_KO | -0.368 | -0.704 |
| EspI_KO | -0.453 | -0.04 |
| PE35_KO | -0.907 | 0.041 |
| PPE68_KO | -0.509 | -0.48 |
| glycerol2 | -0.766 | -0.556 |
| lignocerate | 0.03 | -0.415 |
| oleate | -0.529 | -0.027 |
| phosphatidylcholine | -0.265 | -0.499 |
| acetate | 0.201 | -0.579 |
| glucAc | 0.125 | -0.236 |
| Rv0950ko | 0.148 | -0.6 |
| Rv1096ko | -0.392 | -1.3 |
| Rv3684ko | -0.517 | -0.452 |
| delta_otsA_trehalose | -0.417 | 0.197 |