Top 10 genes with highest correlation to Rv1752/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1616/- | (cc=0.6756) | info on Rv1616/- |
| Rv1059/- | (cc=0.6077) | info on Rv1059/- |
| Rv0766c/cyp123 | (cc=0.5917) | info on Rv0766c/cyp123 |
| Rv1116/- | (cc=0.5785) | info on Rv1116/- |
| Rv3125c/PPE49 | (cc=0.5649) | info on Rv3125c/PPE49 |
| Rv1521/fadD25 | (cc=0.5647) | info on Rv1521/fadD25 |
| Rv3533c/PPE62 | (cc=0.5595) | info on Rv3533c/PPE62 |
| Rv0844c/narL | (cc=0.5574) | info on Rv0844c/narL |
| Rv1386/PE15 | (cc=0.5481) | info on Rv1386/PE15 |
| Rv1551/plsB1 | (cc=0.5462) | info on Rv1551/plsB1 |
Correlation of Rv1752/- with Rv3125c/PPE49
Normalized LFCs for Rv1752/-:
(description and provenance of datasets)
| Rv1752/- | Rv3125c/PPE49 | |
| Fe_supp_jason_reseq | 0.898 | 0.477 |
| low_pH_jason_reseq | -0.161 | -0.905 |
| NO_jason_reseq | -0.764 | -0.341 |
| B6_jason_reseq | -0.729 | -0.782 |
| MHCII_jason_reseq | -0.549 | -0.117 |
| Isoniazid02 | -0.434 | -1.523 |
| Rifampicin4 | 0.555 | 0.601 |
| Ethambutol3 | 1.171 | -0.043 |
| Meropenem3 | 0.194 | -0.69 |
| Vancomycin16 | 0.0 | -0.401 |
| Rv2680_day32 | -2.199 | 0.166 |
| H37Rv_KO_MarP | 0.524 | 0.416 |
| hypoxia_3wks | 2.444 | 0.156 |
| hypoxia_6wks | 2.717 | -0.301 |
| glycerol | 1.779 | -0.758 |
| cholesterol | 0.643 | -0.625 |
| AJ | 1.076 | -0.407 |
| Bibs02 | 0.404 | -0.477 |
| Bibs02c | -1.94 | -0.565 |
| BL6 | 1.559 | 0.71 |
| BL6a | 2.314 | 0.591 |
| BXD01 | 3.174 | 0.585 |
| BXD010 | 1.471 | 0.68 |
| BXD011 | 2.332 | 0.847 |
| BXD03 | 2.639 | 0.866 |
| BXD04 | 3.421 | 0.919 |
| BXD05 | 3.019 | 1.016 |
| BXD06 | 3.229 | 0.893 |
| BXD07 | 2.882 | 0.858 |
| BXD08 | 2.391 | 0.984 |
| BXD09 | 2.702 | 0.923 |
| CAST | 0.779 | -0.404 |
| CCcont | 1.774 | 0.879 |
| DS01 | -1.437 | -0.524 |
| DS02 | -0.989 | -0.102 |
| DS04 | -0.544 | -0.322 |
| DS0c | 0.368 | -0.137 |
| GP01 | 2.24 | -0.031 |
| GP02 | 3.888 | 0.54 |
| GP0c | 2.7 | -0.314 |
| NOD | -0.142 | -0.034 |
| NZO | 1.621 | -0.98 |
| PWK | 0.117 | -0.206 |
| H37Rv_KO_CtpC | 2.829 | 0.68 |
| H37Rv_KO_CtpD | 1.947 | 1.285 |
| H37Rv_KO_Rv1272 | 1.77 | 0.806 |
| H37Rv_KO_SugABC | 2.44 | 1.266 |
| H37Rv_KO_MbtN | 1.34 | 0.88 |
| Trans05 | -0.315 | 0.694 |
| macrophage_unactivated | 1.073 | -0.126 |
| IL1 | 0.234 | -0.208 |
| Rapamycin | 1.197 | -0.365 |
| Tcell | 2.587 | -0.326 |
| GMCSF | 0.504 | -0.137 |
| IFNab | -0.577 | -0.396 |
| IFNg | -0.796 | -0.045 |
| IFNg_GMCSF1 | -0.346 | 0.493 |
| Rv1432_day32 | 0.18 | -0.063 |
| Rv1565c_day32 | -1.777 | -0.232 |
| secA2_input | 0.44 | -0.567 |
| delta_Rv3594 | 0.646 | 0.347 |
| delta_Rv3717 | -0.608 | 0.193 |
| delta_Rv3811 | -0.802 | 0.454 |
| delta_Rv0954 | 1.056 | -0.619 |
| PonA1 | -0.6 | -0.02 |
| EccD1_KO | 0.842 | 0.355 |
| EspI_KO | 0.625 | 0.191 |
| PE35_KO | 1.808 | 0.292 |
| PPE68_KO | 1.414 | 0.054 |
| glycerol2 | -0.336 | -0.175 |
| lignocerate | -1.251 | -0.373 |
| oleate | 0.043 | -0.034 |
| phosphatidylcholine | -0.319 | -0.269 |
| acetate | -2.123 | -0.595 |
| glucAc | -1.959 | -0.52 |
| Rv0950ko | 0.142 | 0.35 |
| Rv1096ko | 1.131 | 0.06 |
| Rv3684ko | -0.976 | -0.157 |
| delta_otsA_trehalose | -2.184 | -1.215 |