Top 10 genes with highest correlation to Rv1741/vapC34:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0325/- | (cc=0.5492) | info on Rv0325/- |
| Rv1319c/- | (cc=0.5031) | info on Rv1319c/- |
| Rv3136A/- | (cc=0.4881) | info on Rv3136A/- |
| Rv2629/- | (cc=0.4822) | info on Rv2629/- |
| Rv3060c/- | (cc=0.4715) | info on Rv3060c/- |
| Rv2059/- | (cc=0.4509) | info on Rv2059/- |
| Rv2020c/- | (cc=0.4459) | info on Rv2020c/- |
| Rv0433/- | (cc=0.4365) | info on Rv0433/- |
| Rv1632c/- | (cc=0.4268) | info on Rv1632c/- |
| Rv0138/- | (cc=0.4242) | info on Rv0138/- |
Correlation of Rv1741/vapC34 with Rv3136A/-
Normalized LFCs for Rv1741/vapC34:
(description and provenance of datasets)
| Rv1741/vapC34 | Rv3136A/- | |
| Fe_supp_jason_reseq | -0.513 | 1.127 |
| low_pH_jason_reseq | -0.883 | -0.478 |
| NO_jason_reseq | 0.0 | 0.179 |
| B6_jason_reseq | 0.595 | 0.81 |
| MHCII_jason_reseq | 1.254 | 0.619 |
| Isoniazid02 | 0.614 | 2.03 |
| Rifampicin4 | 0.119 | 0.0 |
| Ethambutol3 | 2.524 | 2.81 |
| Meropenem3 | 1.614 | 2.511 |
| Vancomycin16 | -0.119 | -0.692 |
| Rv2680_day32 | 0.009 | 0.279 |
| H37Rv_KO_MarP | 0.546 | 1.388 |
| hypoxia_3wks | -0.303 | 0.231 |
| hypoxia_6wks | 0.048 | -0.898 |
| glycerol | -0.401 | -2.093 |
| cholesterol | 0.241 | -1.879 |
| AJ | -0.237 | -1.138 |
| Bibs02 | 0.352 | -0.8 |
| Bibs02c | -0.756 | -0.72 |
| BL6 | -0.778 | -1.346 |
| BL6a | -0.649 | -1.179 |
| BXD01 | -0.32 | -1.104 |
| BXD010 | -0.574 | -1.484 |
| BXD011 | -0.753 | -1.203 |
| BXD03 | -0.984 | -1.241 |
| BXD04 | 0.067 | -0.514 |
| BXD05 | -0.52 | -1.319 |
| BXD06 | -0.748 | -1.018 |
| BXD07 | -0.776 | -1.37 |
| BXD08 | -0.794 | -1.227 |
| BXD09 | -0.831 | -1.377 |
| CAST | 0.14 | -0.45 |
| CCcont | -0.743 | -1.683 |
| DS01 | -0.233 | -1.489 |
| DS02 | -1.597 | -0.975 |
| DS04 | -0.139 | -0.696 |
| DS0c | -1.079 | -1.326 |
| GP01 | -0.554 | -0.861 |
| GP02 | -0.611 | 0.397 |
| GP0c | -0.122 | -2.4 |
| NOD | -0.561 | -0.07 |
| NZO | 0.321 | -0.548 |
| PWK | 0.338 | -0.594 |
| H37Rv_KO_CtpC | 0.212 | -0.46 |
| H37Rv_KO_CtpD | 0.666 | -0.966 |
| H37Rv_KO_Rv1272 | 0.014 | -1.468 |
| H37Rv_KO_SugABC | 0.317 | -0.222 |
| H37Rv_KO_MbtN | 0.228 | -1.743 |
| Trans05 | 0.682 | -0.575 |
| macrophage_unactivated | 1.079 | -1.092 |
| IL1 | 0.148 | -1.071 |
| Rapamycin | -0.322 | -1.608 |
| Tcell | 0.762 | -0.678 |
| GMCSF | 0.259 | -0.782 |
| IFNab | -0.351 | -2.279 |
| IFNg | 0.337 | -1.208 |
| IFNg_GMCSF1 | -0.031 | -0.93 |
| Rv1432_day32 | 0.688 | 0.819 |
| Rv1565c_day32 | -0.455 | -0.333 |
| secA2_input | -0.075 | 0.161 |
| delta_Rv3594 | 0.011 | -0.344 |
| delta_Rv3717 | 0.552 | -1.354 |
| delta_Rv3811 | 0.684 | -0.413 |
| delta_Rv0954 | -0.212 | -0.16 |
| PonA1 | -0.784 | 0.132 |
| EccD1_KO | -0.352 | 0.151 |
| EspI_KO | 0.108 | -0.416 |
| PE35_KO | -0.193 | 0.925 |
| PPE68_KO | -0.432 | 0.771 |
| glycerol2 | -0.14 | 0.186 |
| lignocerate | -0.015 | -0.486 |
| oleate | 0.349 | 0.319 |
| phosphatidylcholine | 0.359 | -0.02 |
| acetate | -0.007 | 0.047 |
| glucAc | -0.418 | 0.104 |
| Rv0950ko | -0.021 | -0.422 |
| Rv1096ko | -1.119 | -0.648 |
| Rv3684ko | -0.681 | -1.215 |
| delta_otsA_trehalose | -0.632 | -0.196 |