Top 10 genes with highest correlation to Rv1741/vapC34:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0325/- | (cc=0.5492) | info on Rv0325/- |
| Rv1319c/- | (cc=0.5031) | info on Rv1319c/- |
| Rv3136A/- | (cc=0.4881) | info on Rv3136A/- |
| Rv2629/- | (cc=0.4822) | info on Rv2629/- |
| Rv3060c/- | (cc=0.4715) | info on Rv3060c/- |
| Rv2059/- | (cc=0.4509) | info on Rv2059/- |
| Rv2020c/- | (cc=0.4459) | info on Rv2020c/- |
| Rv0433/- | (cc=0.4365) | info on Rv0433/- |
| Rv1632c/- | (cc=0.4268) | info on Rv1632c/- |
| Rv0138/- | (cc=0.4242) | info on Rv0138/- |
Correlation of Rv1741/vapC34 with Rv0325/-
Normalized LFCs for Rv1741/vapC34:
(description and provenance of datasets)
| Rv1741/vapC34 | Rv0325/- | |
| Fe_supp_jason_reseq | -0.513 | -0.933 |
| low_pH_jason_reseq | -0.883 | -0.1 |
| NO_jason_reseq | 0.0 | 0.459 |
| B6_jason_reseq | 0.595 | 0.812 |
| MHCII_jason_reseq | 1.254 | 0.663 |
| Isoniazid02 | 0.614 | 2.146 |
| Rifampicin4 | 0.119 | 0.0 |
| Ethambutol3 | 2.524 | 1.867 |
| Meropenem3 | 1.614 | 0.734 |
| Vancomycin16 | -0.119 | 0.196 |
| Rv2680_day32 | 0.009 | 0.179 |
| H37Rv_KO_MarP | 0.546 | 0.226 |
| hypoxia_3wks | -0.303 | 0.742 |
| hypoxia_6wks | 0.048 | 0.286 |
| glycerol | -0.401 | 0.048 |
| cholesterol | 0.241 | 0.406 |
| AJ | -0.237 | -0.04 |
| Bibs02 | 0.352 | 0.155 |
| Bibs02c | -0.756 | -0.755 |
| BL6 | -0.778 | -1.539 |
| BL6a | -0.649 | -0.966 |
| BXD01 | -0.32 | -0.567 |
| BXD010 | -0.574 | -1.32 |
| BXD011 | -0.753 | -0.328 |
| BXD03 | -0.984 | -1.245 |
| BXD04 | 0.067 | -1.3 |
| BXD05 | -0.52 | -1.341 |
| BXD06 | -0.748 | -0.854 |
| BXD07 | -0.776 | -1.477 |
| BXD08 | -0.794 | -0.473 |
| BXD09 | -0.831 | -1.507 |
| CAST | 0.14 | 0.138 |
| CCcont | -0.743 | -1.472 |
| DS01 | -0.233 | -0.151 |
| DS02 | -1.597 | -0.997 |
| DS04 | -0.139 | -0.471 |
| DS0c | -1.079 | 0.273 |
| GP01 | -0.554 | -1.378 |
| GP02 | -0.611 | -0.636 |
| GP0c | -0.122 | -0.421 |
| NOD | -0.561 | -0.099 |
| NZO | 0.321 | 0.156 |
| PWK | 0.338 | -0.004 |
| H37Rv_KO_CtpC | 0.212 | -0.961 |
| H37Rv_KO_CtpD | 0.666 | -0.729 |
| H37Rv_KO_Rv1272 | 0.014 | -1.118 |
| H37Rv_KO_SugABC | 0.317 | -0.529 |
| H37Rv_KO_MbtN | 0.228 | -0.872 |
| Trans05 | 0.682 | -0.003 |
| macrophage_unactivated | 1.079 | -0.735 |
| IL1 | 0.148 | -0.32 |
| Rapamycin | -0.322 | -0.694 |
| Tcell | 0.762 | 0.209 |
| GMCSF | 0.259 | 0.298 |
| IFNab | -0.351 | -0.263 |
| IFNg | 0.337 | -0.069 |
| IFNg_GMCSF1 | -0.031 | 0.16 |
| Rv1432_day32 | 0.688 | -0.11 |
| Rv1565c_day32 | -0.455 | 0.306 |
| secA2_input | -0.075 | -0.47 |
| delta_Rv3594 | 0.011 | -0.236 |
| delta_Rv3717 | 0.552 | 0.121 |
| delta_Rv3811 | 0.684 | 0.126 |
| delta_Rv0954 | -0.212 | 1.239 |
| PonA1 | -0.784 | 0.807 |
| EccD1_KO | -0.352 | -0.25 |
| EspI_KO | 0.108 | 0.117 |
| PE35_KO | -0.193 | -0.263 |
| PPE68_KO | -0.432 | -0.729 |
| glycerol2 | -0.14 | 0.678 |
| lignocerate | -0.015 | 0.183 |
| oleate | 0.349 | 0.872 |
| phosphatidylcholine | 0.359 | 0.657 |
| acetate | -0.007 | -0.374 |
| glucAc | -0.418 | -0.387 |
| Rv0950ko | -0.021 | 0.467 |
| Rv1096ko | -1.119 | -0.341 |
| Rv3684ko | -0.681 | -1.1 |
| delta_otsA_trehalose | -0.632 | -0.601 |