Top 10 genes with highest correlation to Rv1739c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2629/- | (cc=0.5253) | info on Rv2629/- |
| Rv2041c/- | (cc=0.4817) | info on Rv2041c/- |
| Rv2089c/pepE | (cc=0.4773) | info on Rv2089c/pepE |
| Rv1075c/- | (cc=0.4456) | info on Rv1075c/- |
| Rv1998c/- | (cc=0.4263) | info on Rv1998c/- |
| Rv2266/cyp124 | (cc=0.4223) | info on Rv2266/cyp124 |
| Rv0894/- | (cc=0.4082) | info on Rv0894/- |
| Rv2971/- | (cc=0.4007) | info on Rv2971/- |
| Rv1666c/cyp139 | (cc=0.3994) | info on Rv1666c/cyp139 |
| Rv1135c/PPE16 | (cc=0.399) | info on Rv1135c/PPE16 |
Correlation of Rv1739c/- with Rv2266/cyp124
Normalized LFCs for Rv1739c/-:
(description and provenance of datasets)
| Rv1739c/- | Rv2266/cyp124 | |
| Fe_supp_jason_reseq | -0.778 | 0.152 |
| low_pH_jason_reseq | -0.296 | 0.398 |
| NO_jason_reseq | 0.302 | -0.685 |
| B6_jason_reseq | 0.09 | 0.624 |
| MHCII_jason_reseq | 0.226 | -0.08 |
| Isoniazid02 | 0.364 | -0.191 |
| Rifampicin4 | -0.089 | -0.057 |
| Ethambutol3 | 0.612 | -0.305 |
| Meropenem3 | 1.294 | 0.449 |
| Vancomycin16 | -0.088 | -0.17 |
| Rv2680_day32 | 0.101 | -0.363 |
| H37Rv_KO_MarP | -0.093 | -0.164 |
| hypoxia_3wks | 0.0 | 0.622 |
| hypoxia_6wks | 0.198 | 0.664 |
| glycerol | -0.101 | 0.149 |
| cholesterol | -0.243 | 0.0 |
| AJ | -0.057 | -0.237 |
| Bibs02 | -0.397 | 0.441 |
| Bibs02c | 0.017 | 0.953 |
| BL6 | 0.181 | -0.044 |
| BL6a | 0.047 | 0.366 |
| BXD01 | -0.449 | 0.044 |
| BXD010 | 0.23 | 0.053 |
| BXD011 | -0.166 | -0.651 |
| BXD03 | 0.065 | -0.16 |
| BXD04 | -0.105 | -0.689 |
| BXD05 | 0.374 | -0.373 |
| BXD06 | -0.237 | -0.106 |
| BXD07 | 0.044 | 0.24 |
| BXD08 | -0.343 | 0.198 |
| BXD09 | -0.158 | 0.058 |
| CAST | -0.344 | -0.439 |
| CCcont | -0.658 | -0.285 |
| DS01 | -0.019 | 0.409 |
| DS02 | -0.017 | -0.397 |
| DS04 | 0.046 | -0.097 |
| DS0c | -0.324 | 0.464 |
| GP01 | -1.338 | 0.405 |
| GP02 | -0.336 | 0.368 |
| GP0c | -1.42 | -0.871 |
| NOD | -0.252 | -0.355 |
| NZO | 0.095 | 0.014 |
| PWK | -0.33 | -0.617 |
| H37Rv_KO_CtpC | -1.231 | -0.867 |
| H37Rv_KO_CtpD | 0.21 | 0.263 |
| H37Rv_KO_Rv1272 | 0.194 | 0.966 |
| H37Rv_KO_SugABC | 0.381 | 0.593 |
| H37Rv_KO_MbtN | 0.318 | -0.277 |
| Trans05 | 0.952 | 0.613 |
| macrophage_unactivated | 0.549 | -0.363 |
| IL1 | 0.202 | -0.851 |
| Rapamycin | -0.565 | -0.092 |
| Tcell | -0.192 | -0.098 |
| GMCSF | 0.264 | -0.599 |
| IFNab | -0.363 | -0.907 |
| IFNg | -0.254 | -0.607 |
| IFNg_GMCSF1 | -0.299 | -1.474 |
| Rv1432_day32 | -0.09 | 0.471 |
| Rv1565c_day32 | 0.139 | 0.392 |
| secA2_input | -0.269 | -1.01 |
| delta_Rv3594 | 0.584 | 0.84 |
| delta_Rv3717 | 0.573 | 0.584 |
| delta_Rv3811 | 0.83 | 0.802 |
| delta_Rv0954 | -0.176 | 0.291 |
| PonA1 | -0.629 | -0.881 |
| EccD1_KO | 0.457 | 0.96 |
| EspI_KO | 0.046 | 0.653 |
| PE35_KO | 0.531 | 1.327 |
| PPE68_KO | 0.538 | 1.03 |
| glycerol2 | -0.056 | -0.356 |
| lignocerate | -0.292 | -0.247 |
| oleate | 0.339 | 0.081 |
| phosphatidylcholine | 0.106 | -0.394 |
| acetate | -0.504 | -0.256 |
| glucAc | -0.363 | -0.71 |
| Rv0950ko | 0.078 | -0.63 |
| Rv1096ko | 0.525 | -0.401 |
| Rv3684ko | -0.043 | 0.033 |
| delta_otsA_trehalose | -0.957 | -1.33 |