Top 10 genes with highest correlation to Rv1739c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2629/- | (cc=0.5253) | info on Rv2629/- |
| Rv2041c/- | (cc=0.4817) | info on Rv2041c/- |
| Rv2089c/pepE | (cc=0.4773) | info on Rv2089c/pepE |
| Rv1075c/- | (cc=0.4456) | info on Rv1075c/- |
| Rv1998c/- | (cc=0.4263) | info on Rv1998c/- |
| Rv2266/cyp124 | (cc=0.4223) | info on Rv2266/cyp124 |
| Rv0894/- | (cc=0.4082) | info on Rv0894/- |
| Rv2971/- | (cc=0.4007) | info on Rv2971/- |
| Rv1666c/cyp139 | (cc=0.3994) | info on Rv1666c/cyp139 |
| Rv1135c/PPE16 | (cc=0.399) | info on Rv1135c/PPE16 |
Correlation of Rv1739c/- with Rv1666c/cyp139
Normalized LFCs for Rv1739c/-:
(description and provenance of datasets)
| Rv1739c/- | Rv1666c/cyp139 | |
| Fe_supp_jason_reseq | -0.778 | -0.745 |
| low_pH_jason_reseq | -0.296 | -0.502 |
| NO_jason_reseq | 0.302 | -0.488 |
| B6_jason_reseq | 0.09 | 0.34 |
| MHCII_jason_reseq | 0.226 | -0.473 |
| Isoniazid02 | 0.364 | -0.163 |
| Rifampicin4 | -0.089 | -0.06 |
| Ethambutol3 | 0.612 | -0.179 |
| Meropenem3 | 1.294 | 0.576 |
| Vancomycin16 | -0.088 | -0.058 |
| Rv2680_day32 | 0.101 | -0.114 |
| H37Rv_KO_MarP | -0.093 | 0.223 |
| hypoxia_3wks | 0.0 | 0.327 |
| hypoxia_6wks | 0.198 | 0.578 |
| glycerol | -0.101 | 0.676 |
| cholesterol | -0.243 | 0.061 |
| AJ | -0.057 | -0.267 |
| Bibs02 | -0.397 | -0.236 |
| Bibs02c | 0.017 | -0.768 |
| BL6 | 0.181 | -0.12 |
| BL6a | 0.047 | -0.517 |
| BXD01 | -0.449 | 0.07 |
| BXD010 | 0.23 | -0.661 |
| BXD011 | -0.166 | -0.447 |
| BXD03 | 0.065 | 0.248 |
| BXD04 | -0.105 | -0.093 |
| BXD05 | 0.374 | -0.11 |
| BXD06 | -0.237 | -0.297 |
| BXD07 | 0.044 | -0.034 |
| BXD08 | -0.343 | 0.251 |
| BXD09 | -0.158 | -0.378 |
| CAST | -0.344 | -0.329 |
| CCcont | -0.658 | -0.698 |
| DS01 | -0.019 | -0.272 |
| DS02 | -0.017 | -0.403 |
| DS04 | 0.046 | -0.024 |
| DS0c | -0.324 | -0.5 |
| GP01 | -1.338 | -0.155 |
| GP02 | -0.336 | -1.579 |
| GP0c | -1.42 | -0.535 |
| NOD | -0.252 | 0.208 |
| NZO | 0.095 | -0.025 |
| PWK | -0.33 | -0.24 |
| H37Rv_KO_CtpC | -1.231 | -0.349 |
| H37Rv_KO_CtpD | 0.21 | 0.277 |
| H37Rv_KO_Rv1272 | 0.194 | -0.659 |
| H37Rv_KO_SugABC | 0.381 | 0.907 |
| H37Rv_KO_MbtN | 0.318 | 0.536 |
| Trans05 | 0.952 | 0.136 |
| macrophage_unactivated | 0.549 | -0.477 |
| IL1 | 0.202 | -0.81 |
| Rapamycin | -0.565 | -0.629 |
| Tcell | -0.192 | -0.189 |
| GMCSF | 0.264 | 0.246 |
| IFNab | -0.363 | -0.206 |
| IFNg | -0.254 | 0.174 |
| IFNg_GMCSF1 | -0.299 | -0.214 |
| Rv1432_day32 | -0.09 | -0.316 |
| Rv1565c_day32 | 0.139 | -0.346 |
| secA2_input | -0.269 | 0.21 |
| delta_Rv3594 | 0.584 | 0.309 |
| delta_Rv3717 | 0.573 | -0.034 |
| delta_Rv3811 | 0.83 | 0.18 |
| delta_Rv0954 | -0.176 | -0.109 |
| PonA1 | -0.629 | 0.477 |
| EccD1_KO | 0.457 | 0.28 |
| EspI_KO | 0.046 | 0.334 |
| PE35_KO | 0.531 | 0.639 |
| PPE68_KO | 0.538 | 0.771 |
| glycerol2 | -0.056 | 0.121 |
| lignocerate | -0.292 | -0.202 |
| oleate | 0.339 | 0.723 |
| phosphatidylcholine | 0.106 | 0.268 |
| acetate | -0.504 | -0.783 |
| glucAc | -0.363 | -0.965 |
| Rv0950ko | 0.078 | -0.145 |
| Rv1096ko | 0.525 | -0.042 |
| Rv3684ko | -0.043 | -1.359 |
| delta_otsA_trehalose | -0.957 | -0.827 |