Top 10 genes with highest correlation to Rv1730c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2874/dipZ | (cc=0.5344) | info on Rv2874/dipZ |
| Rv3641c/fic | (cc=0.5048) | info on Rv3641c/fic |
| Rv1182/papA3 | (cc=0.4768) | info on Rv1182/papA3 |
| Rv3204/- | (cc=0.4701) | info on Rv3204/- |
| Rv0325/- | (cc=0.4449) | info on Rv0325/- |
| Rv0783c/emrB | (cc=0.4428) | info on Rv0783c/emrB |
| Rv1185c/fadD21 | (cc=0.4319) | info on Rv1185c/fadD21 |
| Rv0933/pstB | (cc=0.4308) | info on Rv0933/pstB |
| Rv1514c/- | (cc=0.4295) | info on Rv1514c/- |
| Rv2636/- | (cc=0.4258) | info on Rv2636/- |
Correlation of Rv1730c/- with Rv3641c/fic
Normalized LFCs for Rv1730c/-:
(description and provenance of datasets)
| Rv1730c/- | Rv3641c/fic | |
| Fe_supp_jason_reseq | 0.45 | 0.134 |
| low_pH_jason_reseq | 1.029 | -0.298 |
| NO_jason_reseq | -0.373 | 0.396 |
| B6_jason_reseq | 1.364 | 0.721 |
| MHCII_jason_reseq | 0.91 | 0.954 |
| Isoniazid02 | -0.3 | 0.196 |
| Rifampicin4 | -0.412 | -0.363 |
| Ethambutol3 | -0.06 | -0.136 |
| Meropenem3 | -0.12 | 0.684 |
| Vancomycin16 | 0.0 | -0.202 |
| Rv2680_day32 | 1.114 | 0.825 |
| H37Rv_KO_MarP | -0.371 | 1.0 |
| hypoxia_3wks | 0.618 | -0.044 |
| hypoxia_6wks | 0.111 | 0.033 |
| glycerol | 0.101 | 0.186 |
| cholesterol | 0.429 | 0.07 |
| AJ | 0.657 | 0.276 |
| Bibs02 | 0.612 | -0.179 |
| Bibs02c | -0.036 | 0.159 |
| BL6 | -0.619 | -0.691 |
| BL6a | -0.63 | -1.482 |
| BXD01 | -0.141 | -0.277 |
| BXD010 | -0.906 | -0.343 |
| BXD011 | -1.085 | -1.176 |
| BXD03 | -0.785 | -0.536 |
| BXD04 | -1.318 | -0.746 |
| BXD05 | -0.781 | -1.159 |
| BXD06 | -0.394 | -1.08 |
| BXD07 | -0.44 | -1.24 |
| BXD08 | 0.0 | -0.466 |
| BXD09 | -0.858 | -1.22 |
| CAST | 0.936 | -0.27 |
| CCcont | -0.62 | -0.475 |
| DS01 | -0.696 | 0.435 |
| DS02 | 0.109 | -0.131 |
| DS04 | 0.308 | 0.807 |
| DS0c | -0.64 | 0.223 |
| GP01 | -1.595 | -1.119 |
| GP02 | -1.111 | -1.47 |
| GP0c | -0.608 | -1.128 |
| NOD | -0.42 | 0.072 |
| NZO | 0.431 | 0.023 |
| PWK | 0.607 | 0.259 |
| H37Rv_KO_CtpC | -0.992 | -0.686 |
| H37Rv_KO_CtpD | -0.022 | -0.398 |
| H37Rv_KO_Rv1272 | -0.818 | -0.506 |
| H37Rv_KO_SugABC | 0.319 | 0.062 |
| H37Rv_KO_MbtN | -1.585 | -0.915 |
| Trans05 | 0.437 | -0.448 |
| macrophage_unactivated | -0.379 | -0.357 |
| IL1 | 0.483 | -1.566 |
| Rapamycin | -0.565 | -1.04 |
| Tcell | -0.192 | -0.619 |
| GMCSF | -0.85 | 0.021 |
| IFNab | -0.46 | -1.303 |
| IFNg | -0.238 | -0.959 |
| IFNg_GMCSF1 | -0.091 | -0.974 |
| Rv1432_day32 | -1.724 | -0.523 |
| Rv1565c_day32 | -0.381 | 0.545 |
| secA2_input | -0.523 | 0.647 |
| delta_Rv3594 | -0.145 | 0.052 |
| delta_Rv3717 | -0.877 | -0.284 |
| delta_Rv3811 | -0.758 | -0.36 |
| delta_Rv0954 | 0.605 | -0.527 |
| PonA1 | -0.862 | -0.074 |
| EccD1_KO | -0.141 | -0.132 |
| EspI_KO | 0.12 | -0.131 |
| PE35_KO | 0.0 | -0.645 |
| PPE68_KO | -0.138 | -0.458 |
| glycerol2 | 0.444 | 0.867 |
| lignocerate | 0.061 | 0.83 |
| oleate | 0.889 | 1.269 |
| phosphatidylcholine | 0.808 | 0.982 |
| acetate | 0.042 | 0.359 |
| glucAc | -0.456 | 0.185 |
| Rv0950ko | -1.095 | -0.121 |
| Rv1096ko | -2.063 | -0.609 |
| Rv3684ko | -1.611 | -0.639 |
| delta_otsA_trehalose | -1.89 | -0.716 |