Top 10 genes with highest correlation to Rv1694/tlyA:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0047c/- | (cc=0.5334) | info on Rv0047c/- |
| Rv2668/- | (cc=0.4868) | info on Rv2668/- |
| Rv2506/- | (cc=0.4819) | info on Rv2506/- |
| Rv2905/lppW | (cc=0.4329) | info on Rv2905/lppW |
| Rv1913/- | (cc=0.4307) | info on Rv1913/- |
| Rv1593c/- | (cc=0.4282) | info on Rv1593c/- |
| Rv2427c/proA | (cc=0.4273) | info on Rv2427c/proA |
| Rv2060/- | (cc=0.4234) | info on Rv2060/- |
| Rv3263/- | (cc=0.4232) | info on Rv3263/- |
| Rv3421c/- | (cc=0.4212) | info on Rv3421c/- |
Correlation of Rv1694/tlyA with Rv1913/-
Normalized LFCs for Rv1694/tlyA:
(description and provenance of datasets)
| Rv1694/tlyA | Rv1913/- | |
| Fe_supp_jason_reseq | -1.88 | 1.913 |
| low_pH_jason_reseq | 1.76 | 0.952 |
| NO_jason_reseq | 3.069 | 0.583 |
| B6_jason_reseq | -0.266 | -0.571 |
| MHCII_jason_reseq | 0.554 | 0.457 |
| Isoniazid02 | 1.355 | -0.116 |
| Rifampicin4 | 0.0 | 0.203 |
| Ethambutol3 | 1.47 | 0.035 |
| Meropenem3 | 0.805 | -0.236 |
| Vancomycin16 | 0.854 | -0.212 |
| Rv2680_day32 | 0.798 | 0.985 |
| H37Rv_KO_MarP | 0.535 | -0.797 |
| hypoxia_3wks | -0.502 | 0.327 |
| hypoxia_6wks | -0.549 | 2.543 |
| glycerol | 0.054 | -0.629 |
| cholesterol | -0.813 | -1.144 |
| AJ | -1.047 | -0.876 |
| Bibs02 | -1.678 | -2.188 |
| Bibs02c | -2.46 | -1.725 |
| BL6 | 0.513 | 0.896 |
| BL6a | -1.158 | -0.032 |
| BXD01 | 1.442 | 1.136 |
| BXD010 | -0.018 | -0.455 |
| BXD011 | 0.579 | 2.06 |
| BXD03 | 0.894 | 0.374 |
| BXD04 | 0.636 | 0.216 |
| BXD05 | 0.325 | 0.68 |
| BXD06 | 1.145 | 1.098 |
| BXD07 | 0.364 | 0.752 |
| BXD08 | 1.263 | -0.414 |
| BXD09 | 0.746 | 0.815 |
| CAST | 0.903 | 0.464 |
| CCcont | 0.376 | 0.694 |
| DS01 | -1.495 | -0.406 |
| DS02 | -1.271 | -0.217 |
| DS04 | 1.015 | 0.204 |
| DS0c | -3.864 | -0.585 |
| GP01 | 0.206 | 0.499 |
| GP02 | 1.595 | 0.468 |
| GP0c | -0.671 | -0.432 |
| NOD | -0.291 | -1.175 |
| NZO | 0.481 | -1.383 |
| PWK | 2.028 | -0.23 |
| H37Rv_KO_CtpC | -2.051 | 0.805 |
| H37Rv_KO_CtpD | 0.819 | -0.316 |
| H37Rv_KO_Rv1272 | 0.565 | 2.984 |
| H37Rv_KO_SugABC | -1.505 | 2.071 |
| H37Rv_KO_MbtN | -0.819 | 0.56 |
| Trans05 | -0.15 | 1.699 |
| macrophage_unactivated | -1.723 | -0.802 |
| IL1 | -0.095 | -6.0 |
| Rapamycin | -0.565 | -6.0 |
| Tcell | 1.662 | 4.027 |
| GMCSF | -1.824 | -6.0 |
| IFNab | -1.865 | -6.0 |
| IFNg | -1.713 | -6.0 |
| IFNg_GMCSF1 | -2.951 | -6.0 |
| Rv1432_day32 | -0.98 | -0.897 |
| Rv1565c_day32 | -1.579 | 0.28 |
| secA2_input | 1.794 | -0.848 |
| delta_Rv3594 | 0.493 | 0.217 |
| delta_Rv3717 | 0.331 | 0.836 |
| delta_Rv3811 | -0.226 | -0.125 |
| delta_Rv0954 | 0.559 | -0.501 |
| PonA1 | -1.24 | -0.291 |
| EccD1_KO | 1.115 | -0.872 |
| EspI_KO | -0.633 | -1.366 |
| PE35_KO | 0.487 | -0.893 |
| PPE68_KO | 0.534 | -0.979 |
| glycerol2 | 0.832 | 0.963 |
| lignocerate | 1.218 | 1.388 |
| oleate | -1.154 | -0.22 |
| phosphatidylcholine | 1.214 | 1.004 |
| acetate | 1.799 | 1.142 |
| glucAc | 1.349 | 1.034 |
| Rv0950ko | 1.818 | 0.715 |
| Rv1096ko | 0.6 | -0.407 |
| Rv3684ko | 1.019 | 0.36 |
| delta_otsA_trehalose | 0.0 | 1.073 |