TnSeqCorr

Top 10 genes with highest correlation to Rv1681/moeX:

update plotcorrelationlink to info on gene
Rv0526/- (cc=0.5485) info on Rv0526/-
Rv0677c/mmpS5 (cc=0.5401) info on Rv0677c/mmpS5
Rv2831/echA16 (cc=0.5386) info on Rv2831/echA16
Rv0848/cysK2 (cc=0.5323) info on Rv0848/cysK2
Rv2089c/pepE (cc=0.5308) info on Rv2089c/pepE
Rv2217/lipB (cc=0.5287) info on Rv2217/lipB
Rv3655c/- (cc=0.4974) info on Rv3655c/-
Rv2083/- (cc=0.4963) info on Rv2083/-
Rv2718c/nrdR (cc=0.4822) info on Rv2718c/nrdR
Rv2983/- (cc=0.4816) info on Rv2983/-

Correlation of Rv1681/moeX with Rv2083/-

Normalized LFCs for Rv1681/moeX:
(description and provenance of datasets)
Rv1681/moeXRv2083/-
Fe_supp_jason_reseq

0.458

0.221

low_pH_jason_reseq

0.979

0.843

NO_jason_reseq

-0.331

-0.782

B6_jason_reseq

0.427

-0.223

MHCII_jason_reseq

-0.095

0.977

Isoniazid02

-0.031

0.64

Rifampicin4

-0.233

1.324

Ethambutol3

2.811

2.234

Meropenem3

-0.225

0.758

Vancomycin16

-0.027

0.499

Rv2680_day32

-0.775

0.184

H37Rv_KO_MarP

-0.734

-0.217

hypoxia_3wks

-0.171

0.53

hypoxia_6wks

0.257

-0.215

glycerol

0.108

0.613

cholesterol

-0.044

0.119

AJ

-0.689

0.829

Bibs02

-0.037

0.27

Bibs02c

0.264

1.643

BL6

-0.347

-0.434

BL6a

-0.164

1.247

BXD01

-0.361

-0.269

BXD010

-0.442

0.488

BXD011

-0.422

-0.09

BXD03

-0.307

0.594

BXD04

-0.496

0.294

BXD05

-0.241

0.045

BXD06

-0.713

-0.221

BXD07

-0.421

-0.458

BXD08

-0.849

0.116

BXD09

-0.446

0.365

CAST

-0.37

0.527

CCcont

-0.873

-0.817

DS01

0.32

1.304

DS02

0.043

0.632

DS04

-0.642

0.371

DS0c

0.236

-0.127

GP01

-1.292

0.039

GP02

-1.421

1.442

GP0c

-0.955

0.378

NOD

-0.21

0.574

NZO

-0.607

0.688

PWK

0.132

0.709

H37Rv_KO_CtpC

-1.294

1.012

H37Rv_KO_CtpD

0.529

0.686

H37Rv_KO_Rv1272

-0.32

1.624

H37Rv_KO_SugABC

0.619

0.703

H37Rv_KO_MbtN

-1.443

-0.832

Trans05

-0.645

0.935

macrophage_unactivated

-0.937

0.83

IL1

-0.341

0.952

Rapamycin

-0.172

0.147

Tcell

-0.375

0.137

GMCSF

-0.214

0.473

IFNab

-0.955

1.052

IFNg

-0.978

1.229

IFNg_GMCSF1

-0.28

0.581

Rv1432_day32

-1.027

0.777

Rv1565c_day32

-0.878

0.584

secA2_input

-0.045

0.205

delta_Rv3594

-0.876

0.662

delta_Rv3717

-0.171

0.94

delta_Rv3811

-0.384

0.956

delta_Rv0954

0.893

0.804

PonA1

0.684

-0.882

EccD1_KO

0.293

1.184

EspI_KO

-0.411

1.363

PE35_KO

-0.385

0.974

PPE68_KO

-0.304

0.336

glycerol2

-1.938

-0.921

lignocerate

-1.831

-1.23

oleate

-1.884

-0.037

phosphatidylcholine

-1.507

-0.534

acetate

-2.529

-1.769

glucAc

-2.108

-2.327

Rv0950ko

-0.745

-0.748

Rv1096ko

-0.247

-0.679

Rv3684ko

-0.724

-1.461

delta_otsA_trehalose

0.336

1.124