Top 10 genes with highest correlation to Rv1674c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1070c/echA8 | (cc=0.6033) | info on Rv1070c/echA8 |
| Rv3055/- | (cc=0.5601) | info on Rv3055/- |
| Rv1367c/- | (cc=0.544) | info on Rv1367c/- |
| Rv1737c/narK2 | (cc=0.5436) | info on Rv1737c/narK2 |
| Rv2490c/PE_PGRS43 | (cc=0.5357) | info on Rv2490c/PE_PGRS43 |
| Rv2872/vapC43 | (cc=0.5247) | info on Rv2872/vapC43 |
| Rv0840c/pip | (cc=0.5242) | info on Rv0840c/pip |
| Rv1089/PE10 | (cc=0.5179) | info on Rv1089/PE10 |
| Rv2426c/- | (cc=0.5152) | info on Rv2426c/- |
| Rv3354/- | (cc=0.5073) | info on Rv3354/- |
Correlation of Rv1674c/- with Rv2490c/PE_PGRS43
Normalized LFCs for Rv1674c/-:
(description and provenance of datasets)
| Rv1674c/- | Rv2490c/PE_PGRS43 | |
| Fe_supp_jason_reseq | 0.107 | -0.684 |
| low_pH_jason_reseq | -1.745 | -0.584 |
| NO_jason_reseq | -0.268 | -0.084 |
| B6_jason_reseq | 0.765 | 0.242 |
| MHCII_jason_reseq | 0.621 | 1.054 |
| Isoniazid02 | -0.127 | 0.659 |
| Rifampicin4 | -0.032 | 0.439 |
| Ethambutol3 | 3.103 | 0.323 |
| Meropenem3 | -0.426 | 0.284 |
| Vancomycin16 | -0.199 | 0.22 |
| Rv2680_day32 | -0.066 | -0.203 |
| H37Rv_KO_MarP | 1.245 | 0.154 |
| hypoxia_3wks | -0.554 | -0.267 |
| hypoxia_6wks | -0.727 | -0.576 |
| glycerol | 0.076 | 1.437 |
| cholesterol | -0.045 | 0.837 |
| AJ | 0.798 | 0.489 |
| Bibs02 | 0.37 | 0.657 |
| Bibs02c | 0.271 | 0.327 |
| BL6 | 0.253 | -0.498 |
| BL6a | -0.535 | -0.319 |
| BXD01 | -0.64 | -0.435 |
| BXD010 | -0.744 | -0.72 |
| BXD011 | -0.45 | -0.716 |
| BXD03 | -2.001 | -0.513 |
| BXD04 | -0.286 | -0.369 |
| BXD05 | -0.461 | -0.248 |
| BXD06 | -0.849 | -0.75 |
| BXD07 | -1.419 | -0.794 |
| BXD08 | -0.151 | -0.648 |
| BXD09 | -0.673 | -0.729 |
| CAST | -0.184 | 0.255 |
| CCcont | -0.289 | -1.368 |
| DS01 | -0.616 | 0.205 |
| DS02 | 0.466 | -0.014 |
| DS04 | 0.802 | 0.679 |
| DS0c | 0.251 | -0.16 |
| GP01 | -0.879 | 0.013 |
| GP02 | 1.05 | 0.675 |
| GP0c | -0.17 | -0.2 |
| NOD | -0.996 | -0.329 |
| NZO | 0.104 | 0.051 |
| PWK | -0.325 | -0.065 |
| H37Rv_KO_CtpC | -1.699 | -0.95 |
| H37Rv_KO_CtpD | 1.108 | 0.314 |
| H37Rv_KO_Rv1272 | 0.454 | -0.471 |
| H37Rv_KO_SugABC | -1.435 | -0.19 |
| H37Rv_KO_MbtN | -1.015 | -0.027 |
| Trans05 | 0.106 | -0.133 |
| macrophage_unactivated | -1.36 | -1.092 |
| IL1 | -1.026 | -1.026 |
| Rapamycin | -0.362 | -0.301 |
| Tcell | 0.156 | -1.225 |
| GMCSF | 1.885 | 0.092 |
| IFNab | -1.24 | -1.23 |
| IFNg | -0.711 | -1.048 |
| IFNg_GMCSF1 | -1.496 | -0.189 |
| Rv1432_day32 | 0.405 | 0.025 |
| Rv1565c_day32 | 0.911 | 0.021 |
| secA2_input | 0.069 | 0.166 |
| delta_Rv3594 | 0.113 | 0.199 |
| delta_Rv3717 | -0.058 | 0.118 |
| delta_Rv3811 | 0.214 | -0.294 |
| delta_Rv0954 | 0.306 | -0.329 |
| PonA1 | -0.881 | -0.216 |
| EccD1_KO | 2.253 | 0.342 |
| EspI_KO | 0.582 | 0.026 |
| PE35_KO | 2.727 | 0.204 |
| PPE68_KO | 2.675 | 0.198 |
| glycerol2 | 0.303 | 0.07 |
| lignocerate | 0.918 | -0.129 |
| oleate | 0.306 | 0.373 |
| phosphatidylcholine | 0.919 | 0.308 |
| acetate | 0.69 | 0.216 |
| glucAc | 0.716 | 0.101 |
| Rv0950ko | 0.537 | 0.88 |
| Rv1096ko | 1.695 | 0.392 |
| Rv3684ko | 0.917 | 0.488 |
| delta_otsA_trehalose | -1.084 | -1.402 |