Top 10 genes with highest correlation to Rv1671/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1324/- | (cc=0.5356) | info on Rv1324/- |
| Rv2359/zur | (cc=0.5191) | info on Rv2359/zur |
| Rv1431/- | (cc=0.5125) | info on Rv1431/- |
| Rv1135c/PPE16 | (cc=0.5044) | info on Rv1135c/PPE16 |
| Rv3603c/- | (cc=0.4972) | info on Rv3603c/- |
| Rv2270/lppN | (cc=0.4924) | info on Rv2270/lppN |
| Rv2907c/rimM | (cc=0.4727) | info on Rv2907c/rimM |
| Rv2844/- | (cc=0.4713) | info on Rv2844/- |
| Rv2847c/cysG | (cc=0.4694) | info on Rv2847c/cysG |
| Rv1896c/- | (cc=0.4664) | info on Rv1896c/- |
Correlation of Rv1671/- with Rv1431/-
Normalized LFCs for Rv1671/-:
(description and provenance of datasets)
| Rv1671/- | Rv1431/- | |
| Fe_supp_jason_reseq | 0.368 | 1.705 |
| low_pH_jason_reseq | -0.738 | -0.413 |
| NO_jason_reseq | 0.557 | 0.646 |
| B6_jason_reseq | -0.21 | 1.166 |
| MHCII_jason_reseq | 0.613 | 0.675 |
| Isoniazid02 | 0.224 | 0.195 |
| Rifampicin4 | -0.089 | 0.257 |
| Ethambutol3 | 1.385 | 0.311 |
| Meropenem3 | -0.343 | -0.086 |
| Vancomycin16 | 0.085 | 0.584 |
| Rv2680_day32 | 0.07 | -0.045 |
| H37Rv_KO_MarP | 0.099 | -0.394 |
| hypoxia_3wks | -0.355 | 0.526 |
| hypoxia_6wks | -0.487 | 0.844 |
| glycerol | -0.32 | -0.015 |
| cholesterol | -0.149 | -1.049 |
| AJ | -0.116 | -0.052 |
| Bibs02 | -0.397 | 0.264 |
| Bibs02c | 0.376 | 1.147 |
| BL6 | 0.099 | -0.009 |
| BL6a | 0.329 | 0.829 |
| BXD01 | -0.257 | 0.323 |
| BXD010 | 1.104 | 0.368 |
| BXD011 | 0.061 | 0.366 |
| BXD03 | -0.562 | -0.168 |
| BXD04 | 0.288 | 0.17 |
| BXD05 | 0.67 | -0.225 |
| BXD06 | -0.372 | -0.212 |
| BXD07 | 0.66 | 0.444 |
| BXD08 | -0.09 | 0.029 |
| BXD09 | 0.501 | -0.118 |
| CAST | 0.073 | 0.132 |
| CCcont | -0.294 | 0.176 |
| DS01 | 0.0 | 0.086 |
| DS02 | 0.268 | -0.254 |
| DS04 | 0.122 | -0.593 |
| DS0c | -0.108 | 0.031 |
| GP01 | -0.653 | -0.2 |
| GP02 | -1.386 | -1.039 |
| GP0c | -0.541 | -0.797 |
| NOD | -0.151 | 0.081 |
| NZO | -0.205 | -0.201 |
| PWK | -0.033 | 0.257 |
| H37Rv_KO_CtpC | 0.74 | 0.127 |
| H37Rv_KO_CtpD | 0.729 | 0.174 |
| H37Rv_KO_Rv1272 | 1.466 | 0.583 |
| H37Rv_KO_SugABC | -1.502 | 0.036 |
| H37Rv_KO_MbtN | 1.126 | 0.446 |
| Trans05 | 0.355 | -0.521 |
| macrophage_unactivated | 0.139 | 0.095 |
| IL1 | -0.78 | -0.377 |
| Rapamycin | -1.154 | -0.856 |
| Tcell | -1.225 | -0.238 |
| GMCSF | -0.465 | -0.164 |
| IFNab | -0.139 | -0.284 |
| IFNg | -0.802 | -0.251 |
| IFNg_GMCSF1 | 0.047 | -0.471 |
| Rv1432_day32 | 1.671 | 5.473 |
| Rv1565c_day32 | 0.256 | 0.087 |
| secA2_input | 0.081 | 0.219 |
| delta_Rv3594 | 0.788 | 0.676 |
| delta_Rv3717 | 0.367 | 0.653 |
| delta_Rv3811 | 1.051 | 0.88 |
| delta_Rv0954 | 0.611 | 0.308 |
| PonA1 | 0.0 | 0.12 |
| EccD1_KO | 0.895 | 0.654 |
| EspI_KO | -0.157 | 0.867 |
| PE35_KO | 1.986 | 1.21 |
| PPE68_KO | 2.742 | 1.414 |
| glycerol2 | -0.531 | -0.279 |
| lignocerate | -0.325 | -0.077 |
| oleate | -0.163 | 0.037 |
| phosphatidylcholine | -0.265 | 0.403 |
| acetate | -0.63 | -0.105 |
| glucAc | -0.362 | 1.56 |
| Rv0950ko | -0.908 | 0.241 |
| Rv1096ko | -1.233 | -0.169 |
| Rv3684ko | -1.569 | 0.134 |
| delta_otsA_trehalose | -1.057 | -0.105 |