Top 10 genes with highest correlation to Rv1647/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3447c/eccC4 | (cc=0.5565) | info on Rv3447c/eccC4 |
| Rv1118c/- | (cc=0.5479) | info on Rv1118c/- |
| Rv1467c/fadE15 | (cc=0.5174) | info on Rv1467c/fadE15 |
| Rv1774/- | (cc=0.5144) | info on Rv1774/- |
| Rv1148c/- | (cc=0.5144) | info on Rv1148c/- |
| Rv3309c/upp | (cc=0.5067) | info on Rv3309c/upp |
| Rv2566/- | (cc=0.5028) | info on Rv2566/- |
| Rv1766/- | (cc=0.4991) | info on Rv1766/- |
| Rv0737/- | (cc=0.4985) | info on Rv0737/- |
| Rv2306A/- | (cc=0.4982) | info on Rv2306A/- |
Correlation of Rv1647/- with Rv3309c/upp
Normalized LFCs for Rv1647/-:
(description and provenance of datasets)
| Rv1647/- | Rv3309c/upp | |
| Fe_supp_jason_reseq | 0.949 | -0.039 |
| low_pH_jason_reseq | 0.144 | -1.22 |
| NO_jason_reseq | -0.436 | 0.223 |
| B6_jason_reseq | 0.996 | 0.324 |
| MHCII_jason_reseq | 1.006 | 0.505 |
| Isoniazid02 | -1.043 | -0.512 |
| Rifampicin4 | -1.213 | -1.841 |
| Ethambutol3 | -1.504 | -0.784 |
| Meropenem3 | -0.919 | 0.847 |
| Vancomycin16 | -0.793 | -1.926 |
| Rv2680_day32 | 0.5 | -0.875 |
| H37Rv_KO_MarP | 0.01 | 0.144 |
| hypoxia_3wks | 0.518 | 1.196 |
| hypoxia_6wks | 0.361 | 0.0 |
| glycerol | -0.679 | -0.076 |
| cholesterol | -0.695 | -0.241 |
| AJ | -0.267 | -0.113 |
| Bibs02 | 0.615 | 0.841 |
| Bibs02c | -0.268 | 0.044 |
| BL6 | -0.434 | -0.626 |
| BL6a | -0.159 | -0.108 |
| BXD01 | -0.889 | -0.844 |
| BXD010 | -0.245 | -0.062 |
| BXD011 | -0.717 | 0.033 |
| BXD03 | -1.129 | -2.975 |
| BXD04 | -0.712 | -0.619 |
| BXD05 | -0.785 | 0.007 |
| BXD06 | -0.456 | -1.257 |
| BXD07 | -0.159 | -0.404 |
| BXD08 | -0.305 | -0.798 |
| BXD09 | -1.045 | -0.208 |
| CAST | 0.27 | -0.369 |
| CCcont | -0.954 | -1.829 |
| DS01 | -0.508 | 0.204 |
| DS02 | 0.115 | -0.095 |
| DS04 | -0.299 | 0.639 |
| DS0c | 0.537 | 0.457 |
| GP01 | 0.865 | 0.953 |
| GP02 | 0.728 | -0.951 |
| GP0c | 0.338 | -0.72 |
| NOD | -1.036 | -1.787 |
| NZO | -0.071 | 0.322 |
| PWK | 0.161 | 0.031 |
| H37Rv_KO_CtpC | 0.564 | -0.071 |
| H37Rv_KO_CtpD | 1.06 | -1.642 |
| H37Rv_KO_Rv1272 | -0.351 | -0.999 |
| H37Rv_KO_SugABC | -0.344 | -1.881 |
| H37Rv_KO_MbtN | 0.915 | 0.199 |
| Trans05 | -1.311 | -1.18 |
| macrophage_unactivated | -1.247 | -1.802 |
| IL1 | -1.332 | -0.747 |
| Rapamycin | -0.951 | -0.737 |
| Tcell | -0.932 | -1.632 |
| GMCSF | -0.692 | -0.818 |
| IFNab | -0.865 | -1.082 |
| IFNg | -1.034 | -1.232 |
| IFNg_GMCSF1 | -0.698 | -0.754 |
| Rv1432_day32 | -0.533 | 0.364 |
| Rv1565c_day32 | 0.281 | -0.583 |
| secA2_input | 0.177 | 0.196 |
| delta_Rv3594 | 0.191 | -1.6 |
| delta_Rv3717 | -0.062 | -1.709 |
| delta_Rv3811 | -0.504 | -1.496 |
| delta_Rv0954 | 0.362 | -0.642 |
| PonA1 | -0.193 | -1.707 |
| EccD1_KO | 1.263 | 0.181 |
| EspI_KO | 1.172 | 1.56 |
| PE35_KO | 0.484 | 0.788 |
| PPE68_KO | 0.582 | 0.474 |
| glycerol2 | 0.291 | -0.447 |
| lignocerate | 0.403 | -0.862 |
| oleate | 0.542 | 0.498 |
| phosphatidylcholine | 0.574 | -0.182 |
| acetate | 0.236 | -0.635 |
| glucAc | -0.11 | -0.864 |
| Rv0950ko | 0.066 | -0.124 |
| Rv1096ko | 0.452 | 0.914 |
| Rv3684ko | -0.439 | -0.612 |
| delta_otsA_trehalose | 0.497 | 1.236 |