Top 10 genes with highest correlation to Rv1647/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3447c/eccC4 | (cc=0.5565) | info on Rv3447c/eccC4 |
| Rv1118c/- | (cc=0.5479) | info on Rv1118c/- |
| Rv1467c/fadE15 | (cc=0.5174) | info on Rv1467c/fadE15 |
| Rv1774/- | (cc=0.5144) | info on Rv1774/- |
| Rv1148c/- | (cc=0.5144) | info on Rv1148c/- |
| Rv3309c/upp | (cc=0.5067) | info on Rv3309c/upp |
| Rv2566/- | (cc=0.5028) | info on Rv2566/- |
| Rv1766/- | (cc=0.4991) | info on Rv1766/- |
| Rv0737/- | (cc=0.4985) | info on Rv0737/- |
| Rv2306A/- | (cc=0.4982) | info on Rv2306A/- |
Correlation of Rv1647/- with Rv1467c/fadE15
Normalized LFCs for Rv1647/-:
(description and provenance of datasets)
| Rv1647/- | Rv1467c/fadE15 | |
| Fe_supp_jason_reseq | 0.949 | -1.137 |
| low_pH_jason_reseq | 0.144 | -0.445 |
| NO_jason_reseq | -0.436 | 0.333 |
| B6_jason_reseq | 0.996 | 0.297 |
| MHCII_jason_reseq | 1.006 | 1.286 |
| Isoniazid02 | -1.043 | -0.773 |
| Rifampicin4 | -1.213 | -0.403 |
| Ethambutol3 | -1.504 | -0.775 |
| Meropenem3 | -0.919 | -1.094 |
| Vancomycin16 | -0.793 | -0.69 |
| Rv2680_day32 | 0.5 | -0.793 |
| H37Rv_KO_MarP | 0.01 | 0.246 |
| hypoxia_3wks | 0.518 | -0.598 |
| hypoxia_6wks | 0.361 | 0.019 |
| glycerol | -0.679 | -0.65 |
| cholesterol | -0.695 | -0.791 |
| AJ | -0.267 | 0.348 |
| Bibs02 | 0.615 | -0.302 |
| Bibs02c | -0.268 | -0.593 |
| BL6 | -0.434 | -0.231 |
| BL6a | -0.159 | -1.21 |
| BXD01 | -0.889 | -0.815 |
| BXD010 | -0.245 | -1.216 |
| BXD011 | -0.717 | -0.778 |
| BXD03 | -1.129 | -1.257 |
| BXD04 | -0.712 | -0.447 |
| BXD05 | -0.785 | -0.463 |
| BXD06 | -0.456 | -0.748 |
| BXD07 | -0.159 | -1.167 |
| BXD08 | -0.305 | -0.746 |
| BXD09 | -1.045 | -0.956 |
| CAST | 0.27 | -0.01 |
| CCcont | -0.954 | -1.919 |
| DS01 | -0.508 | -0.897 |
| DS02 | 0.115 | -0.904 |
| DS04 | -0.299 | -0.668 |
| DS0c | 0.537 | -0.522 |
| GP01 | 0.865 | -0.357 |
| GP02 | 0.728 | 0.585 |
| GP0c | 0.338 | -0.361 |
| NOD | -1.036 | 0.775 |
| NZO | -0.071 | -0.051 |
| PWK | 0.161 | 0.563 |
| H37Rv_KO_CtpC | 0.564 | -1.041 |
| H37Rv_KO_CtpD | 1.06 | 0.116 |
| H37Rv_KO_Rv1272 | -0.351 | -0.339 |
| H37Rv_KO_SugABC | -0.344 | 0.263 |
| H37Rv_KO_MbtN | 0.915 | 0.0 |
| Trans05 | -1.311 | -0.567 |
| macrophage_unactivated | -1.247 | -0.795 |
| IL1 | -1.332 | -1.157 |
| Rapamycin | -0.951 | -1.332 |
| Tcell | -0.932 | -0.736 |
| GMCSF | -0.692 | -0.99 |
| IFNab | -0.865 | -1.687 |
| IFNg | -1.034 | -0.965 |
| IFNg_GMCSF1 | -0.698 | -0.792 |
| Rv1432_day32 | -0.533 | 0.0 |
| Rv1565c_day32 | 0.281 | -0.13 |
| secA2_input | 0.177 | -0.562 |
| delta_Rv3594 | 0.191 | 0.092 |
| delta_Rv3717 | -0.062 | 0.569 |
| delta_Rv3811 | -0.504 | 0.055 |
| delta_Rv0954 | 0.362 | 0.412 |
| PonA1 | -0.193 | 0.642 |
| EccD1_KO | 1.263 | 0.628 |
| EspI_KO | 1.172 | 0.516 |
| PE35_KO | 0.484 | -0.07 |
| PPE68_KO | 0.582 | -0.077 |
| glycerol2 | 0.291 | -0.244 |
| lignocerate | 0.403 | 0.116 |
| oleate | 0.542 | -0.498 |
| phosphatidylcholine | 0.574 | 0.112 |
| acetate | 0.236 | -0.083 |
| glucAc | -0.11 | 0.114 |
| Rv0950ko | 0.066 | -0.244 |
| Rv1096ko | 0.452 | 0.145 |
| Rv3684ko | -0.439 | -0.196 |
| delta_otsA_trehalose | 0.497 | 0.305 |