Top 10 genes with highest correlation to Rv1647/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3447c/eccC4 | (cc=0.5565) | info on Rv3447c/eccC4 |
| Rv1118c/- | (cc=0.5479) | info on Rv1118c/- |
| Rv1467c/fadE15 | (cc=0.5174) | info on Rv1467c/fadE15 |
| Rv1774/- | (cc=0.5144) | info on Rv1774/- |
| Rv1148c/- | (cc=0.5144) | info on Rv1148c/- |
| Rv3309c/upp | (cc=0.5067) | info on Rv3309c/upp |
| Rv2566/- | (cc=0.5028) | info on Rv2566/- |
| Rv1766/- | (cc=0.4991) | info on Rv1766/- |
| Rv0737/- | (cc=0.4985) | info on Rv0737/- |
| Rv2306A/- | (cc=0.4982) | info on Rv2306A/- |
Correlation of Rv1647/- with Rv3447c/eccC4
Normalized LFCs for Rv1647/-:
(description and provenance of datasets)
| Rv1647/- | Rv3447c/eccC4 | |
| Fe_supp_jason_reseq | 0.949 | 0.377 |
| low_pH_jason_reseq | 0.144 | -0.102 |
| NO_jason_reseq | -0.436 | -0.215 |
| B6_jason_reseq | 0.996 | 0.128 |
| MHCII_jason_reseq | 1.006 | 0.166 |
| Isoniazid02 | -1.043 | -2.02 |
| Rifampicin4 | -1.213 | 0.133 |
| Ethambutol3 | -1.504 | -0.233 |
| Meropenem3 | -0.919 | -1.743 |
| Vancomycin16 | -0.793 | -0.841 |
| Rv2680_day32 | 0.5 | 0.24 |
| H37Rv_KO_MarP | 0.01 | 0.972 |
| hypoxia_3wks | 0.518 | 0.255 |
| hypoxia_6wks | 0.361 | 0.134 |
| glycerol | -0.679 | -0.399 |
| cholesterol | -0.695 | -0.108 |
| AJ | -0.267 | 0.264 |
| Bibs02 | 0.615 | 0.499 |
| Bibs02c | -0.268 | -0.414 |
| BL6 | -0.434 | -0.443 |
| BL6a | -0.159 | -0.839 |
| BXD01 | -0.889 | -0.356 |
| BXD010 | -0.245 | -1.181 |
| BXD011 | -0.717 | -0.908 |
| BXD03 | -1.129 | -0.623 |
| BXD04 | -0.712 | 0.28 |
| BXD05 | -0.785 | -0.346 |
| BXD06 | -0.456 | -0.718 |
| BXD07 | -0.159 | -0.378 |
| BXD08 | -0.305 | 0.151 |
| BXD09 | -1.045 | -1.141 |
| CAST | 0.27 | 0.287 |
| CCcont | -0.954 | -0.633 |
| DS01 | -0.508 | 0.164 |
| DS02 | 0.115 | -0.054 |
| DS04 | -0.299 | -0.623 |
| DS0c | 0.537 | 0.71 |
| GP01 | 0.865 | 0.374 |
| GP02 | 0.728 | 1.007 |
| GP0c | 0.338 | -0.257 |
| NOD | -1.036 | -0.226 |
| NZO | -0.071 | 0.117 |
| PWK | 0.161 | 0.023 |
| H37Rv_KO_CtpC | 0.564 | 0.019 |
| H37Rv_KO_CtpD | 1.06 | -0.111 |
| H37Rv_KO_Rv1272 | -0.351 | 0.19 |
| H37Rv_KO_SugABC | -0.344 | 0.415 |
| H37Rv_KO_MbtN | 0.915 | -0.051 |
| Trans05 | -1.311 | -0.221 |
| macrophage_unactivated | -1.247 | -0.619 |
| IL1 | -1.332 | -0.495 |
| Rapamycin | -0.951 | -0.601 |
| Tcell | -0.932 | -0.264 |
| GMCSF | -0.692 | 0.203 |
| IFNab | -0.865 | -0.686 |
| IFNg | -1.034 | -0.446 |
| IFNg_GMCSF1 | -0.698 | -0.082 |
| Rv1432_day32 | -0.533 | 0.223 |
| Rv1565c_day32 | 0.281 | 0.085 |
| secA2_input | 0.177 | 0.825 |
| delta_Rv3594 | 0.191 | -0.5 |
| delta_Rv3717 | -0.062 | -0.076 |
| delta_Rv3811 | -0.504 | 0.057 |
| delta_Rv0954 | 0.362 | 0.121 |
| PonA1 | -0.193 | -0.141 |
| EccD1_KO | 1.263 | -0.214 |
| EspI_KO | 1.172 | 0.456 |
| PE35_KO | 0.484 | 0.411 |
| PPE68_KO | 0.582 | 0.451 |
| glycerol2 | 0.291 | 0.538 |
| lignocerate | 0.403 | 0.421 |
| oleate | 0.542 | 0.35 |
| phosphatidylcholine | 0.574 | 0.346 |
| acetate | 0.236 | 0.12 |
| glucAc | -0.11 | 0.074 |
| Rv0950ko | 0.066 | -0.431 |
| Rv1096ko | 0.452 | 0.703 |
| Rv3684ko | -0.439 | 0.599 |
| delta_otsA_trehalose | 0.497 | 0.939 |