Top 10 genes with highest correlation to Rv1644/tsnR:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3263/- | (cc=0.5497) | info on Rv3263/- |
| Rv0210/- | (cc=0.5414) | info on Rv0210/- |
| Rv1210/tagA | (cc=0.5236) | info on Rv1210/tagA |
| Rv0813c/- | (cc=0.4968) | info on Rv0813c/- |
| Rv0037c/- | (cc=0.4543) | info on Rv0037c/- |
| Rv1211/- | (cc=0.4455) | info on Rv1211/- |
| Rv0047c/- | (cc=0.4315) | info on Rv0047c/- |
| Rv3484/cpsA | (cc=0.4307) | info on Rv3484/cpsA |
| Rv1341/- | (cc=0.4257) | info on Rv1341/- |
| Rv1915/aceAa | (cc=0.4236) | info on Rv1915/aceAa |
Correlation of Rv1644/tsnR with Rv3263/-
Normalized LFCs for Rv1644/tsnR:
(description and provenance of datasets)
| Rv1644/tsnR | Rv3263/- | |
| Fe_supp_jason_reseq | -0.755 | -1.905 |
| low_pH_jason_reseq | -0.78 | -0.959 |
| NO_jason_reseq | 0.898 | 0.837 |
| B6_jason_reseq | -0.134 | 0.922 |
| MHCII_jason_reseq | 0.317 | -0.43 |
| Isoniazid02 | -0.132 | -0.489 |
| Rifampicin4 | -0.084 | 0.16 |
| Ethambutol3 | 0.81 | 0.758 |
| Meropenem3 | -0.065 | 0.109 |
| Vancomycin16 | 0.846 | -0.695 |
| Rv2680_day32 | 0.924 | -0.234 |
| H37Rv_KO_MarP | -0.821 | -0.452 |
| hypoxia_3wks | -0.235 | -0.247 |
| hypoxia_6wks | 1.46 | 0.578 |
| glycerol | -1.115 | -0.582 |
| cholesterol | -0.902 | -0.775 |
| AJ | -0.457 | -0.21 |
| Bibs02 | -0.882 | -0.609 |
| Bibs02c | -1.487 | -0.332 |
| BL6 | -0.113 | 0.115 |
| BL6a | -1.159 | -0.258 |
| BXD01 | -0.203 | 0.184 |
| BXD010 | 0.024 | 0.337 |
| BXD011 | -0.309 | 1.005 |
| BXD03 | -0.155 | 0.09 |
| BXD04 | -0.48 | 0.789 |
| BXD05 | -0.569 | 0.495 |
| BXD06 | -0.288 | 0.821 |
| BXD07 | -0.332 | 0.652 |
| BXD08 | 0.405 | 0.599 |
| BXD09 | -0.507 | 0.19 |
| CAST | 0.576 | 1.431 |
| CCcont | -0.93 | -1.225 |
| DS01 | -1.228 | -0.944 |
| DS02 | -0.389 | -0.731 |
| DS04 | -0.374 | -0.682 |
| DS0c | -0.867 | -1.051 |
| GP01 | 0.413 | 0.595 |
| GP02 | 0.573 | 0.579 |
| GP0c | 0.732 | 0.048 |
| NOD | 0.013 | 0.044 |
| NZO | 0.212 | 0.621 |
| PWK | 0.195 | 1.826 |
| H37Rv_KO_CtpC | -0.134 | 1.37 |
| H37Rv_KO_CtpD | -0.642 | 0.098 |
| H37Rv_KO_Rv1272 | -0.56 | -0.939 |
| H37Rv_KO_SugABC | 0.888 | 0.037 |
| H37Rv_KO_MbtN | -0.208 | 0.144 |
| Trans05 | -0.255 | 0.422 |
| macrophage_unactivated | -1.023 | -1.591 |
| IL1 | 0.409 | 0.027 |
| Rapamycin | -0.675 | -0.789 |
| Tcell | -0.182 | 0.469 |
| GMCSF | -0.568 | -0.325 |
| IFNab | -0.073 | -1.094 |
| IFNg | -0.216 | 0.457 |
| IFNg_GMCSF1 | -0.151 | 0.39 |
| Rv1432_day32 | 1.456 | 1.272 |
| Rv1565c_day32 | -1.401 | -1.303 |
| secA2_input | 0.532 | 0.507 |
| delta_Rv3594 | 1.126 | 0.381 |
| delta_Rv3717 | 1.769 | 0.79 |
| delta_Rv3811 | 1.413 | 0.272 |
| delta_Rv0954 | 0.26 | 0.044 |
| PonA1 | -0.927 | -0.117 |
| EccD1_KO | 0.155 | 0.467 |
| EspI_KO | -0.057 | -0.057 |
| PE35_KO | -0.263 | 0.222 |
| PPE68_KO | -0.262 | 0.042 |
| glycerol2 | 0.261 | 0.905 |
| lignocerate | 0.572 | 0.463 |
| oleate | -0.281 | -0.22 |
| phosphatidylcholine | 0.618 | 1.006 |
| acetate | 0.118 | -0.12 |
| glucAc | 0.251 | 0.277 |
| Rv0950ko | 0.597 | 0.645 |
| Rv1096ko | -0.166 | 0.193 |
| Rv3684ko | -0.141 | 0.901 |
| delta_otsA_trehalose | 1.053 | 0.021 |