Top 10 genes with highest correlation to Rv1623c/cydA:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1621c/cydD | (cc=0.8676) | info on Rv1621c/cydD |
| Rv1622c/cydB | (cc=0.8667) | info on Rv1622c/cydB |
| Rv1620c/cydC | (cc=0.7071) | info on Rv1620c/cydC |
| Rv2190c/- | (cc=0.6095) | info on Rv2190c/- |
| Rv3207c/- | (cc=0.5483) | info on Rv3207c/- |
| Rv1836c/- | (cc=0.5086) | info on Rv1836c/- |
| Rv2696c/- | (cc=0.4776) | info on Rv2696c/- |
| Rv1507A/- | (cc=0.4725) | info on Rv1507A/- |
| Rv1551/plsB1 | (cc=0.4678) | info on Rv1551/plsB1 |
| Rv2144c/- | (cc=0.4666) | info on Rv2144c/- |
Correlation of Rv1623c/cydA with Rv1836c/-
Normalized LFCs for Rv1623c/cydA:
(description and provenance of datasets)
| Rv1623c/cydA | Rv1836c/- | |
| Fe_supp_jason_reseq | 2.363 | 3.703 |
| low_pH_jason_reseq | 1.506 | -0.44 |
| NO_jason_reseq | -4.702 | -0.69 |
| B6_jason_reseq | -0.759 | -0.292 |
| MHCII_jason_reseq | -1.292 | 0.492 |
| Isoniazid02 | -0.183 | -2.187 |
| Rifampicin4 | -0.341 | -2.943 |
| Ethambutol3 | 0.0 | -1.216 |
| Meropenem3 | -0.151 | -1.533 |
| Vancomycin16 | -0.334 | -2.653 |
| Rv2680_day32 | 0.728 | 1.226 |
| H37Rv_KO_MarP | -2.253 | -6.0 |
| hypoxia_3wks | 0.0 | -0.961 |
| hypoxia_6wks | -0.464 | -0.503 |
| glycerol | 1.138 | -0.202 |
| cholesterol | 0.381 | 0.253 |
| AJ | 0.324 | -0.232 |
| Bibs02 | -0.642 | -0.183 |
| Bibs02c | 1.593 | -0.209 |
| BL6 | 0.254 | 1.02 |
| BL6a | 2.593 | 1.339 |
| BXD01 | 0.416 | 1.272 |
| BXD010 | 0.88 | 0.323 |
| BXD011 | 1.938 | 1.988 |
| BXD03 | 0.875 | 0.341 |
| BXD04 | 1.837 | 0.563 |
| BXD05 | 1.118 | 1.21 |
| BXD06 | 1.719 | 0.523 |
| BXD07 | 1.555 | 0.865 |
| BXD08 | 1.274 | 1.248 |
| BXD09 | 1.542 | 0.95 |
| CAST | -0.581 | 0.21 |
| CCcont | 2.556 | 2.888 |
| DS01 | -0.38 | -0.236 |
| DS02 | -0.764 | -0.217 |
| DS04 | 0.916 | 0.883 |
| DS0c | 0.157 | 0.0 |
| GP01 | 3.382 | 0.964 |
| GP02 | 3.182 | 1.165 |
| GP0c | 4.011 | 1.002 |
| NOD | -0.566 | -0.225 |
| NZO | -0.503 | -0.199 |
| PWK | 0.0 | -0.196 |
| H37Rv_KO_CtpC | 1.865 | 0.739 |
| H37Rv_KO_CtpD | 0.405 | 0.918 |
| H37Rv_KO_Rv1272 | 0.0 | 0.953 |
| H37Rv_KO_SugABC | 0.37 | 1.362 |
| H37Rv_KO_MbtN | 5.071 | 1.116 |
| Trans05 | 0.0 | 1.066 |
| macrophage_unactivated | 0.303 | 0.669 |
| IL1 | 3.111 | 0.0 |
| Rapamycin | 0.571 | 0.227 |
| Tcell | -0.166 | 0.0 |
| GMCSF | 2.297 | 0.38 |
| IFNab | 0.0 | 1.844 |
| IFNg | 1.694 | 1.058 |
| IFNg_GMCSF1 | 0.584 | 0.452 |
| Rv1432_day32 | 4.133 | 1.748 |
| Rv1565c_day32 | 1.579 | 0.0 |
| secA2_input | -1.082 | -2.174 |
| delta_Rv3594 | 0.0 | 2.695 |
| delta_Rv3717 | 1.664 | 3.555 |
| delta_Rv3811 | -0.348 | 2.842 |
| delta_Rv0954 | 2.017 | -1.461 |
| PonA1 | 3.713 | -1.387 |
| EccD1_KO | -0.286 | 0.148 |
| EspI_KO | 0.77 | -0.051 |
| PE35_KO | -1.467 | -1.496 |
| PPE68_KO | 0.634 | 0.0 |
| glycerol2 | 0.14 | -0.193 |
| lignocerate | 0.235 | -0.168 |
| oleate | 0.0 | -0.196 |
| phosphatidylcholine | 0.14 | -0.193 |
| acetate | 0.603 | 0.0 |
| glucAc | 0.74 | -0.143 |
| Rv0950ko | -3.986 | -6.0 |
| Rv1096ko | -1.24 | -0.03 |
| Rv3684ko | 0.986 | 1.677 |
| delta_otsA_trehalose | -2.142 | -0.288 |