Top 10 genes with highest correlation to Rv1620c/cydC:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1623c/cydA | (cc=0.7071) | info on Rv1623c/cydA |
| Rv1622c/cydB | (cc=0.6724) | info on Rv1622c/cydB |
| Rv1621c/cydD | (cc=0.6593) | info on Rv1621c/cydD |
| Rv1551/plsB1 | (cc=0.4214) | info on Rv1551/plsB1 |
| Rv2439c/proB | (cc=0.4143) | info on Rv2439c/proB |
| Rv1159/pimE | (cc=0.4127) | info on Rv1159/pimE |
| Rv3207c/- | (cc=0.4073) | info on Rv3207c/- |
| Rv0127/mak | (cc=0.4043) | info on Rv0127/mak |
| Rv1867/- | (cc=0.4019) | info on Rv1867/- |
| Rv0412c/- | (cc=0.3948) | info on Rv0412c/- |
Correlation of Rv1620c/cydC with Rv1623c/cydA
Normalized LFCs for Rv1620c/cydC:
(description and provenance of datasets)
| Rv1620c/cydC | Rv1623c/cydA | |
| Fe_supp_jason_reseq | 0.398 | 2.363 |
| low_pH_jason_reseq | -0.811 | 1.506 |
| NO_jason_reseq | -2.809 | -4.702 |
| B6_jason_reseq | -1.187 | -0.759 |
| MHCII_jason_reseq | -1.046 | -1.292 |
| Isoniazid02 | -0.383 | -0.183 |
| Rifampicin4 | 0.0 | -0.341 |
| Ethambutol3 | -0.32 | 0.0 |
| Meropenem3 | -0.315 | -0.151 |
| Vancomycin16 | 0.0 | -0.334 |
| Rv2680_day32 | 0.764 | 0.728 |
| H37Rv_KO_MarP | -2.145 | -2.253 |
| hypoxia_3wks | 0.0 | 0.0 |
| hypoxia_6wks | 0.0 | -0.464 |
| glycerol | 0.471 | 1.138 |
| cholesterol | -0.132 | 0.381 |
| AJ | -0.212 | 0.324 |
| Bibs02 | -0.167 | -0.642 |
| Bibs02c | -0.399 | 1.593 |
| BL6 | 0.376 | 0.254 |
| BL6a | 0.319 | 2.593 |
| BXD01 | -0.119 | 0.416 |
| BXD010 | 0.206 | 0.88 |
| BXD011 | 0.464 | 1.938 |
| BXD03 | -0.258 | 0.875 |
| BXD04 | 2.242 | 1.837 |
| BXD05 | 1.505 | 1.118 |
| BXD06 | 0.641 | 1.719 |
| BXD07 | -0.126 | 1.555 |
| BXD08 | 0.485 | 1.274 |
| BXD09 | 0.226 | 1.542 |
| CAST | 0.0 | -0.581 |
| CCcont | 1.016 | 2.556 |
| DS01 | -0.45 | -0.38 |
| DS02 | -0.414 | -0.764 |
| DS04 | -0.37 | 0.916 |
| DS0c | -0.198 | 0.157 |
| GP01 | 3.117 | 3.382 |
| GP02 | 4.755 | 3.182 |
| GP0c | 3.61 | 4.011 |
| NOD | -0.428 | -0.566 |
| NZO | 0.0 | -0.503 |
| PWK | 0.0 | 0.0 |
| H37Rv_KO_CtpC | 0.135 | 1.865 |
| H37Rv_KO_CtpD | 0.381 | 0.405 |
| H37Rv_KO_Rv1272 | -0.269 | 0.0 |
| H37Rv_KO_SugABC | -0.09 | 0.37 |
| H37Rv_KO_MbtN | 2.607 | 5.071 |
| Trans05 | -0.249 | 0.0 |
| macrophage_unactivated | 0.761 | 0.303 |
| IL1 | 1.326 | 3.111 |
| Rapamycin | 0.74 | 0.571 |
| Tcell | 0.0 | -0.166 |
| GMCSF | -0.364 | 2.297 |
| IFNab | 0.0 | 0.0 |
| IFNg | 0.93 | 1.694 |
| IFNg_GMCSF1 | 0.757 | 0.584 |
| Rv1432_day32 | 0.999 | 4.133 |
| Rv1565c_day32 | 0.599 | 1.579 |
| secA2_input | 0.477 | -1.082 |
| delta_Rv3594 | 0.164 | 0.0 |
| delta_Rv3717 | 1.114 | 1.664 |
| delta_Rv3811 | -0.358 | -0.348 |
| delta_Rv0954 | 0.894 | 2.017 |
| PonA1 | 3.025 | 3.713 |
| EccD1_KO | 0.352 | -0.286 |
| EspI_KO | 2.165 | 0.77 |
| PE35_KO | 0.601 | -1.467 |
| PPE68_KO | 0.96 | 0.634 |
| glycerol2 | 0.531 | 0.14 |
| lignocerate | 0.712 | 0.235 |
| oleate | 0.0 | 0.0 |
| phosphatidylcholine | 0.193 | 0.14 |
| acetate | 1.127 | 0.603 |
| glucAc | 1.306 | 0.74 |
| Rv0950ko | -1.616 | -3.986 |
| Rv1096ko | 0.148 | -1.24 |
| Rv3684ko | 3.435 | 0.986 |
| delta_otsA_trehalose | 0.226 | -2.142 |