Top 10 genes with highest correlation to Rv1566c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1006/- | (cc=0.7361) | info on Rv1006/- |
| Rv2363/amiA2 | (cc=0.6946) | info on Rv2363/amiA2 |
| Rv0437c/psd | (cc=0.6652) | info on Rv0437c/psd |
| Rv3207c/- | (cc=0.64) | info on Rv3207c/- |
| Rv2224c/caeA | (cc=0.6235) | info on Rv2224c/caeA |
| Rv2190c/- | (cc=0.6197) | info on Rv2190c/- |
| Rv1633/uvrB | (cc=0.6158) | info on Rv1633/uvrB |
| Rv0017c/rodA | (cc=0.6002) | info on Rv0017c/rodA |
| Rv2553c/- | (cc=0.5932) | info on Rv2553c/- |
| Rv1836c/- | (cc=0.5837) | info on Rv1836c/- |
Correlation of Rv1566c/- with Rv1633/uvrB
Normalized LFCs for Rv1566c/-:
(description and provenance of datasets)
| Rv1566c/- | Rv1633/uvrB | |
| Fe_supp_jason_reseq | 2.439 | 2.98 |
| low_pH_jason_reseq | 0.775 | 0.507 |
| NO_jason_reseq | -0.32 | -0.517 |
| B6_jason_reseq | -1.245 | -1.215 |
| MHCII_jason_reseq | 0.996 | -0.73 |
| Isoniazid02 | 0.936 | -0.648 |
| Rifampicin4 | -2.255 | 0.022 |
| Ethambutol3 | -1.097 | 0.067 |
| Meropenem3 | -1.109 | -0.71 |
| Vancomycin16 | -4.985 | -1.326 |
| Rv2680_day32 | -2.019 | -0.518 |
| H37Rv_KO_MarP | -2.066 | -0.563 |
| hypoxia_3wks | -0.08 | -2.743 |
| hypoxia_6wks | -1.566 | -2.575 |
| glycerol | -0.566 | 1.565 |
| cholesterol | 0.32 | 0.932 |
| AJ | -0.948 | -0.124 |
| Bibs02 | -0.057 | 0.348 |
| Bibs02c | 1.417 | 0.958 |
| BL6 | 0.423 | 1.479 |
| BL6a | 0.918 | 2.274 |
| BXD01 | 0.411 | 1.401 |
| BXD010 | 0.826 | 1.514 |
| BXD011 | 0.513 | 2.168 |
| BXD03 | 0.12 | 1.77 |
| BXD04 | 1.105 | 1.523 |
| BXD05 | 0.845 | 1.762 |
| BXD06 | -0.322 | 1.844 |
| BXD07 | 0.306 | 1.792 |
| BXD08 | 0.294 | 1.572 |
| BXD09 | 1.101 | 1.902 |
| CAST | -1.278 | -0.692 |
| CCcont | 2.871 | 3.594 |
| DS01 | 0.0 | 0.12 |
| DS02 | 0.0 | 0.318 |
| DS04 | -0.544 | 0.888 |
| DS0c | 0.066 | 0.596 |
| GP01 | -0.715 | 1.062 |
| GP02 | -0.169 | 0.159 |
| GP0c | -0.474 | 2.173 |
| NOD | -0.63 | -1.199 |
| NZO | -1.849 | -0.897 |
| PWK | -1.819 | -0.732 |
| H37Rv_KO_CtpC | 1.074 | 2.151 |
| H37Rv_KO_CtpD | 1.713 | 2.17 |
| H37Rv_KO_Rv1272 | -0.044 | 2.201 |
| H37Rv_KO_SugABC | 1.792 | 1.396 |
| H37Rv_KO_MbtN | 0.778 | 3.197 |
| Trans05 | 0.631 | 1.691 |
| macrophage_unactivated | 1.294 | 0.792 |
| IL1 | -1.231 | -0.469 |
| Rapamycin | -0.178 | 0.15 |
| Tcell | -1.437 | 0.746 |
| GMCSF | -0.481 | 0.0 |
| IFNab | 0.278 | 1.817 |
| IFNg | -0.604 | 0.067 |
| IFNg_GMCSF1 | -0.374 | -0.408 |
| Rv1432_day32 | -0.824 | -0.617 |
| Rv1565c_day32 | 0.442 | -0.706 |
| secA2_input | -0.809 | 1.027 |
| delta_Rv3594 | -0.038 | 0.829 |
| delta_Rv3717 | 0.211 | 0.982 |
| delta_Rv3811 | 0.152 | 0.671 |
| delta_Rv0954 | 0.986 | 0.178 |
| PonA1 | -0.219 | -0.372 |
| EccD1_KO | -0.148 | -0.595 |
| EspI_KO | -0.331 | -0.248 |
| PE35_KO | -0.201 | -0.114 |
| PPE68_KO | 0.454 | -0.026 |
| glycerol2 | -1.534 | -1.772 |
| lignocerate | -0.177 | -1.842 |
| oleate | -2.406 | -2.678 |
| phosphatidylcholine | -1.401 | -2.389 |
| acetate | 0.311 | -0.09 |
| glucAc | 0.207 | 0.511 |
| Rv0950ko | -3.673 | -0.383 |
| Rv1096ko | -0.283 | -0.208 |
| Rv3684ko | 0.455 | -0.295 |
| delta_otsA_trehalose | -0.562 | 0.476 |