Top 10 genes with highest correlation to Rv1566c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1006/- | (cc=0.7361) | info on Rv1006/- |
| Rv2363/amiA2 | (cc=0.6946) | info on Rv2363/amiA2 |
| Rv0437c/psd | (cc=0.6652) | info on Rv0437c/psd |
| Rv3207c/- | (cc=0.64) | info on Rv3207c/- |
| Rv2224c/caeA | (cc=0.6235) | info on Rv2224c/caeA |
| Rv2190c/- | (cc=0.6197) | info on Rv2190c/- |
| Rv1633/uvrB | (cc=0.6158) | info on Rv1633/uvrB |
| Rv0017c/rodA | (cc=0.6002) | info on Rv0017c/rodA |
| Rv2553c/- | (cc=0.5932) | info on Rv2553c/- |
| Rv1836c/- | (cc=0.5837) | info on Rv1836c/- |
Correlation of Rv1566c/- with Rv0437c/psd
Normalized LFCs for Rv1566c/-:
(description and provenance of datasets)
| Rv1566c/- | Rv0437c/psd | |
| Fe_supp_jason_reseq | 2.439 | 0.923 |
| low_pH_jason_reseq | 0.775 | 0.842 |
| NO_jason_reseq | -0.32 | -0.69 |
| B6_jason_reseq | -1.245 | -0.292 |
| MHCII_jason_reseq | 0.996 | -0.123 |
| Isoniazid02 | 0.936 | 1.106 |
| Rifampicin4 | -2.255 | -2.05 |
| Ethambutol3 | -1.097 | -1.327 |
| Meropenem3 | -1.109 | -2.165 |
| Vancomycin16 | -4.985 | -5.385 |
| Rv2680_day32 | -2.019 | -0.359 |
| H37Rv_KO_MarP | -2.066 | -1.926 |
| hypoxia_3wks | -0.08 | -0.885 |
| hypoxia_6wks | -1.566 | -1.013 |
| glycerol | -0.566 | 0.184 |
| cholesterol | 0.32 | 1.049 |
| AJ | -0.948 | 0.0 |
| Bibs02 | -0.057 | 0.0 |
| Bibs02c | 1.417 | 1.613 |
| BL6 | 0.423 | 0.0 |
| BL6a | 0.918 | 0.346 |
| BXD01 | 0.411 | -0.13 |
| BXD010 | 0.826 | -0.128 |
| BXD011 | 0.513 | 0.222 |
| BXD03 | 0.12 | -0.135 |
| BXD04 | 1.105 | -0.124 |
| BXD05 | 0.845 | -0.135 |
| BXD06 | -0.322 | -0.133 |
| BXD07 | 0.306 | -0.138 |
| BXD08 | 0.294 | -0.133 |
| BXD09 | 1.101 | -0.14 |
| CAST | -1.278 | -0.23 |
| CCcont | 2.871 | 2.54 |
| DS01 | 0.0 | 0.926 |
| DS02 | 0.0 | -0.217 |
| DS04 | -0.544 | 0.177 |
| DS0c | 0.066 | 0.0 |
| GP01 | -0.715 | 0.172 |
| GP02 | -0.169 | -0.083 |
| GP0c | -0.474 | 0.0 |
| NOD | -0.63 | -0.225 |
| NZO | -1.849 | -0.199 |
| PWK | -1.819 | -0.196 |
| H37Rv_KO_CtpC | 1.074 | 2.059 |
| H37Rv_KO_CtpD | 1.713 | 0.221 |
| H37Rv_KO_Rv1272 | -0.044 | 0.457 |
| H37Rv_KO_SugABC | 1.792 | 0.0 |
| H37Rv_KO_MbtN | 0.778 | 0.927 |
| Trans05 | 0.631 | -0.131 |
| macrophage_unactivated | 1.294 | -0.363 |
| IL1 | -1.231 | -0.715 |
| Rapamycin | -0.178 | 1.188 |
| Tcell | -1.437 | -1.235 |
| GMCSF | -0.481 | 0.283 |
| IFNab | 0.278 | 0.323 |
| IFNg | -0.604 | -1.013 |
| IFNg_GMCSF1 | -0.374 | -1.191 |
| Rv1432_day32 | -0.824 | -0.884 |
| Rv1565c_day32 | 0.442 | 0.924 |
| secA2_input | -0.809 | 0.371 |
| delta_Rv3594 | -0.038 | 0.506 |
| delta_Rv3717 | 0.211 | -1.723 |
| delta_Rv3811 | 0.152 | 0.134 |
| delta_Rv0954 | 0.986 | 1.647 |
| PonA1 | -0.219 | 0.829 |
| EccD1_KO | -0.148 | 0.855 |
| EspI_KO | -0.331 | 0.79 |
| PE35_KO | -0.201 | 1.482 |
| PPE68_KO | 0.454 | 1.245 |
| glycerol2 | -1.534 | 0.0 |
| lignocerate | -0.177 | 0.0 |
| oleate | -2.406 | 0.0 |
| phosphatidylcholine | -1.401 | 0.0 |
| acetate | 0.311 | 0.0 |
| glucAc | 0.207 | 0.0 |
| Rv0950ko | -3.673 | -0.899 |
| Rv1096ko | -0.283 | 0.546 |
| Rv3684ko | 0.455 | 0.062 |
| delta_otsA_trehalose | -0.562 | 0.04 |