Top 10 genes with highest correlation to Rv1564c/treX:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3363c/- | (cc=0.5751) | info on Rv3363c/- |
| Rv3168/- | (cc=0.5383) | info on Rv3168/- |
| Rv3218/- | (cc=0.479) | info on Rv3218/- |
| Rv0045c/- | (cc=0.4724) | info on Rv0045c/- |
| Rv1513/- | (cc=0.4578) | info on Rv1513/- |
| Rv2655c/- | (cc=0.4573) | info on Rv2655c/- |
| Rv0551c/fadD8 | (cc=0.457) | info on Rv0551c/fadD8 |
| Rv3320c/vapC44 | (cc=0.4508) | info on Rv3320c/vapC44 |
| Rv0592/mce2D | (cc=0.4396) | info on Rv0592/mce2D |
| Rv0112/gca | (cc=0.4356) | info on Rv0112/gca |
Correlation of Rv1564c/treX with Rv1513/-
Normalized LFCs for Rv1564c/treX:
(description and provenance of datasets)
| Rv1564c/treX | Rv1513/- | |
| Fe_supp_jason_reseq | 0.115 | 1.725 |
| low_pH_jason_reseq | 0.877 | -0.539 |
| NO_jason_reseq | 0.617 | 1.62 |
| B6_jason_reseq | 1.042 | 0.052 |
| MHCII_jason_reseq | 0.449 | -0.72 |
| Isoniazid02 | 0.048 | -0.39 |
| Rifampicin4 | 0.845 | -0.726 |
| Ethambutol3 | 0.395 | -0.326 |
| Meropenem3 | 1.053 | -0.531 |
| Vancomycin16 | 0.417 | -0.072 |
| Rv2680_day32 | 0.667 | 0.881 |
| H37Rv_KO_MarP | 0.742 | 1.051 |
| hypoxia_3wks | 1.902 | 1.061 |
| hypoxia_6wks | 0.647 | -0.731 |
| glycerol | -0.344 | -0.992 |
| cholesterol | -0.247 | -0.568 |
| AJ | 0.166 | 0.417 |
| Bibs02 | 0.409 | 0.694 |
| Bibs02c | -0.039 | -1.808 |
| BL6 | 0.985 | -1.52 |
| BL6a | 0.29 | 1.083 |
| BXD01 | 0.412 | 0.9 |
| BXD010 | 0.482 | 0.041 |
| BXD011 | 0.463 | 1.169 |
| BXD03 | 0.544 | 0.74 |
| BXD04 | 0.357 | 0.993 |
| BXD05 | 0.607 | 1.324 |
| BXD06 | 0.658 | 0.9 |
| BXD07 | 0.931 | 1.112 |
| BXD08 | 0.226 | 1.006 |
| BXD09 | 0.356 | 0.822 |
| CAST | 0.697 | 1.26 |
| CCcont | -0.028 | -0.988 |
| DS01 | -0.852 | -0.419 |
| DS02 | -0.517 | 0.449 |
| DS04 | -0.885 | -1.677 |
| DS0c | -0.841 | -0.652 |
| GP01 | 0.969 | -0.138 |
| GP02 | 0.217 | 1.734 |
| GP0c | 0.464 | -0.86 |
| NOD | -0.241 | -1.351 |
| NZO | 0.851 | 0.845 |
| PWK | 1.611 | -1.695 |
| H37Rv_KO_CtpC | -0.586 | -1.53 |
| H37Rv_KO_CtpD | -0.346 | 1.586 |
| H37Rv_KO_Rv1272 | -0.319 | 0.877 |
| H37Rv_KO_SugABC | 0.293 | -0.933 |
| H37Rv_KO_MbtN | 1.052 | -0.183 |
| Trans05 | 0.222 | 1.088 |
| macrophage_unactivated | 0.0 | -1.474 |
| IL1 | 0.258 | -1.622 |
| Rapamycin | -0.08 | -1.197 |
| Tcell | -0.085 | -0.189 |
| GMCSF | 0.0 | -0.367 |
| IFNab | -0.039 | 0.333 |
| IFNg | 0.102 | -2.106 |
| IFNg_GMCSF1 | 0.352 | -1.549 |
| Rv1432_day32 | 0.997 | 0.0 |
| Rv1565c_day32 | 0.103 | -1.82 |
| secA2_input | -0.753 | -1.398 |
| delta_Rv3594 | -0.621 | -1.741 |
| delta_Rv3717 | 0.17 | -1.601 |
| delta_Rv3811 | -0.631 | -2.787 |
| delta_Rv0954 | -0.255 | -0.7 |
| PonA1 | -0.557 | -3.817 |
| EccD1_KO | -1.503 | -1.171 |
| EspI_KO | -1.101 | -0.776 |
| PE35_KO | -0.379 | 0.0 |
| PPE68_KO | -0.806 | -0.374 |
| glycerol2 | -0.926 | -0.388 |
| lignocerate | -0.788 | -1.431 |
| oleate | -0.917 | 0.352 |
| phosphatidylcholine | -0.711 | -0.506 |
| acetate | -0.404 | -1.553 |
| glucAc | -0.206 | -4.028 |
| Rv0950ko | -0.112 | 1.885 |
| Rv1096ko | -0.29 | 0.682 |
| Rv3684ko | -0.445 | 2.047 |
| delta_otsA_trehalose | 3.876 | 5.088 |