Top 10 genes with highest correlation to Rv1564c/treX:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3363c/- | (cc=0.5751) | info on Rv3363c/- |
| Rv3168/- | (cc=0.5383) | info on Rv3168/- |
| Rv3218/- | (cc=0.479) | info on Rv3218/- |
| Rv0045c/- | (cc=0.4724) | info on Rv0045c/- |
| Rv1513/- | (cc=0.4578) | info on Rv1513/- |
| Rv2655c/- | (cc=0.4573) | info on Rv2655c/- |
| Rv0551c/fadD8 | (cc=0.457) | info on Rv0551c/fadD8 |
| Rv3320c/vapC44 | (cc=0.4508) | info on Rv3320c/vapC44 |
| Rv0592/mce2D | (cc=0.4396) | info on Rv0592/mce2D |
| Rv0112/gca | (cc=0.4356) | info on Rv0112/gca |
Correlation of Rv1564c/treX with Rv3363c/-
Normalized LFCs for Rv1564c/treX:
(description and provenance of datasets)
| Rv1564c/treX | Rv3363c/- | |
| Fe_supp_jason_reseq | 0.115 | 0.289 |
| low_pH_jason_reseq | 0.877 | 0.775 |
| NO_jason_reseq | 0.617 | -0.63 |
| B6_jason_reseq | 1.042 | 0.575 |
| MHCII_jason_reseq | 0.449 | 0.795 |
| Isoniazid02 | 0.048 | 0.355 |
| Rifampicin4 | 0.845 | -1.194 |
| Ethambutol3 | 0.395 | -0.557 |
| Meropenem3 | 1.053 | -0.158 |
| Vancomycin16 | 0.417 | -0.172 |
| Rv2680_day32 | 0.667 | -0.786 |
| H37Rv_KO_MarP | 0.742 | 0.014 |
| hypoxia_3wks | 1.902 | -0.231 |
| hypoxia_6wks | 0.647 | 0.023 |
| glycerol | -0.344 | 0.408 |
| cholesterol | -0.247 | 0.45 |
| AJ | 0.166 | 0.079 |
| Bibs02 | 0.409 | 0.616 |
| Bibs02c | -0.039 | -0.821 |
| BL6 | 0.985 | 0.017 |
| BL6a | 0.29 | -0.25 |
| BXD01 | 0.412 | -0.374 |
| BXD010 | 0.482 | -0.073 |
| BXD011 | 0.463 | 0.018 |
| BXD03 | 0.544 | 0.449 |
| BXD04 | 0.357 | -0.044 |
| BXD05 | 0.607 | -0.137 |
| BXD06 | 0.658 | -0.136 |
| BXD07 | 0.931 | -0.12 |
| BXD08 | 0.226 | 0.01 |
| BXD09 | 0.356 | -0.222 |
| CAST | 0.697 | 0.506 |
| CCcont | -0.028 | -0.697 |
| DS01 | -0.852 | -0.51 |
| DS02 | -0.517 | -0.109 |
| DS04 | -0.885 | -1.105 |
| DS0c | -0.841 | -0.396 |
| GP01 | 0.969 | -1.314 |
| GP02 | 0.217 | -0.626 |
| GP0c | 0.464 | 0.162 |
| NOD | -0.241 | -0.096 |
| NZO | 0.851 | -0.465 |
| PWK | 1.611 | -0.142 |
| H37Rv_KO_CtpC | -0.586 | 0.252 |
| H37Rv_KO_CtpD | -0.346 | -1.654 |
| H37Rv_KO_Rv1272 | -0.319 | 0.584 |
| H37Rv_KO_SugABC | 0.293 | -0.14 |
| H37Rv_KO_MbtN | 1.052 | -0.538 |
| Trans05 | 0.222 | 1.0 |
| macrophage_unactivated | 0.0 | -0.448 |
| IL1 | 0.258 | 0.359 |
| Rapamycin | -0.08 | -0.322 |
| Tcell | -0.085 | -0.808 |
| GMCSF | 0.0 | -0.763 |
| IFNab | -0.039 | 0.0 |
| IFNg | 0.102 | 0.045 |
| IFNg_GMCSF1 | 0.352 | 0.666 |
| Rv1432_day32 | 0.997 | 1.076 |
| Rv1565c_day32 | 0.103 | -0.488 |
| secA2_input | -0.753 | -0.164 |
| delta_Rv3594 | -0.621 | -0.285 |
| delta_Rv3717 | 0.17 | -1.44 |
| delta_Rv3811 | -0.631 | -0.671 |
| delta_Rv0954 | -0.255 | -1.07 |
| PonA1 | -0.557 | -1.526 |
| EccD1_KO | -1.503 | 0.0 |
| EspI_KO | -1.101 | -1.047 |
| PE35_KO | -0.379 | -0.866 |
| PPE68_KO | -0.806 | -1.289 |
| glycerol2 | -0.926 | -2.812 |
| lignocerate | -0.788 | -1.844 |
| oleate | -0.917 | -2.2 |
| phosphatidylcholine | -0.711 | -2.286 |
| acetate | -0.404 | -2.276 |
| glucAc | -0.206 | -1.217 |
| Rv0950ko | -0.112 | 0.196 |
| Rv1096ko | -0.29 | 0.501 |
| Rv3684ko | -0.445 | -0.147 |
| delta_otsA_trehalose | 3.876 | 4.02 |