Top 10 genes with highest correlation to Rv1560/vapB11:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0371c/- | (cc=0.6612) | info on Rv0371c/- |
| Rv3152/nuoH | (cc=0.5913) | info on Rv3152/nuoH |
| Rv3218/- | (cc=0.5641) | info on Rv3218/- |
| Rv3567c/hsaB | (cc=0.545) | info on Rv3567c/hsaB |
| Rv3143/- | (cc=0.5405) | info on Rv3143/- |
| Rv2430c/PPE41 | (cc=0.5295) | info on Rv2430c/PPE41 |
| Rv0930/pstA1 | (cc=0.5255) | info on Rv0930/pstA1 |
| Rv1278/- | (cc=0.5223) | info on Rv1278/- |
| Rv0822c/- | (cc=0.5175) | info on Rv0822c/- |
| Rv1891/- | (cc=0.5081) | info on Rv1891/- |
Correlation of Rv1560/vapB11 with Rv2430c/PPE41
Normalized LFCs for Rv1560/vapB11:
(description and provenance of datasets)
| Rv1560/vapB11 | Rv2430c/PPE41 | |
| Fe_supp_jason_reseq | -2.395 | -0.259 |
| low_pH_jason_reseq | -0.151 | -0.617 |
| NO_jason_reseq | 0.591 | -0.326 |
| B6_jason_reseq | -2.447 | -0.565 |
| MHCII_jason_reseq | -1.809 | -1.222 |
| Isoniazid02 | 0.141 | -0.362 |
| Rifampicin4 | 1.17 | -0.379 |
| Ethambutol3 | 0.333 | -0.539 |
| Meropenem3 | 0.488 | 0.604 |
| Vancomycin16 | 0.499 | -0.541 |
| Rv2680_day32 | -1.282 | -0.546 |
| H37Rv_KO_MarP | -0.567 | 0.78 |
| hypoxia_3wks | -1.978 | -0.016 |
| hypoxia_6wks | -0.217 | -0.558 |
| glycerol | -0.157 | -1.482 |
| cholesterol | -0.509 | -0.355 |
| AJ | 0.471 | 1.329 |
| Bibs02 | -0.642 | 0.293 |
| Bibs02c | 3.812 | -0.441 |
| BL6 | 4.189 | 2.014 |
| BL6a | 3.734 | 1.624 |
| BXD01 | 2.879 | 1.73 |
| BXD010 | 2.52 | 2.268 |
| BXD011 | 3.56 | 2.003 |
| BXD03 | 2.371 | 2.085 |
| BXD04 | 1.221 | 2.116 |
| BXD05 | 4.371 | 2.269 |
| BXD06 | 2.466 | 1.836 |
| BXD07 | 2.957 | 1.829 |
| BXD08 | 1.622 | 1.59 |
| BXD09 | 3.392 | 1.891 |
| CAST | -0.179 | 1.024 |
| CCcont | 2.533 | 1.659 |
| DS01 | 0.479 | 1.092 |
| DS02 | 1.493 | 0.558 |
| DS04 | 0.62 | 0.769 |
| DS0c | 3.804 | 0.509 |
| GP01 | 1.109 | 0.134 |
| GP02 | 2.859 | 2.462 |
| GP0c | 4.362 | 0.343 |
| NOD | -0.174 | 1.447 |
| NZO | 2.852 | 0.483 |
| PWK | -0.315 | 0.872 |
| H37Rv_KO_CtpC | -0.261 | 0.914 |
| H37Rv_KO_CtpD | -0.445 | 1.252 |
| H37Rv_KO_Rv1272 | 2.605 | 1.399 |
| H37Rv_KO_SugABC | -0.159 | 1.91 |
| H37Rv_KO_MbtN | -0.26 | 1.129 |
| Trans05 | 1.171 | 2.226 |
| macrophage_unactivated | 0.189 | 1.076 |
| IL1 | 0.11 | 0.125 |
| Rapamycin | 0.568 | 0.19 |
| Tcell | 0.567 | 0.094 |
| GMCSF | 1.402 | 0.636 |
| IFNab | 0.877 | 0.308 |
| IFNg | 0.984 | 0.537 |
| IFNg_GMCSF1 | 0.336 | 0.688 |
| Rv1432_day32 | 0.0 | -0.428 |
| Rv1565c_day32 | 0.0 | 0.782 |
| secA2_input | 1.191 | -0.891 |
| delta_Rv3594 | -0.696 | -0.571 |
| delta_Rv3717 | 0.583 | -1.178 |
| delta_Rv3811 | -2.602 | -0.265 |
| delta_Rv0954 | -1.243 | -1.172 |
| PonA1 | 1.973 | -0.066 |
| EccD1_KO | 0.0 | -0.625 |
| EspI_KO | -1.452 | -0.331 |
| PE35_KO | 1.963 | -0.726 |
| PPE68_KO | 0.902 | -0.701 |
| glycerol2 | -0.708 | -0.084 |
| lignocerate | -1.299 | -0.073 |
| oleate | -2.657 | 0.234 |
| phosphatidylcholine | -0.297 | 0.041 |
| acetate | -0.17 | 0.017 |
| glucAc | 0.033 | -0.627 |
| Rv0950ko | 0.941 | -0.136 |
| Rv1096ko | 0.941 | -0.22 |
| Rv3684ko | -1.307 | -0.508 |
| delta_otsA_trehalose | 0.0 | 1.428 |