Top 10 genes with highest correlation to Rv1560/vapB11:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0371c/- | (cc=0.6612) | info on Rv0371c/- |
| Rv3152/nuoH | (cc=0.5913) | info on Rv3152/nuoH |
| Rv3218/- | (cc=0.5641) | info on Rv3218/- |
| Rv3567c/hsaB | (cc=0.545) | info on Rv3567c/hsaB |
| Rv3143/- | (cc=0.5405) | info on Rv3143/- |
| Rv2430c/PPE41 | (cc=0.5295) | info on Rv2430c/PPE41 |
| Rv0930/pstA1 | (cc=0.5255) | info on Rv0930/pstA1 |
| Rv1278/- | (cc=0.5223) | info on Rv1278/- |
| Rv0822c/- | (cc=0.5175) | info on Rv0822c/- |
| Rv1891/- | (cc=0.5081) | info on Rv1891/- |
Correlation of Rv1560/vapB11 with Rv1891/-
Normalized LFCs for Rv1560/vapB11:
(description and provenance of datasets)
| Rv1560/vapB11 | Rv1891/- | |
| Fe_supp_jason_reseq | -2.395 | 0.152 |
| low_pH_jason_reseq | -0.151 | 0.182 |
| NO_jason_reseq | 0.591 | -0.58 |
| B6_jason_reseq | -2.447 | -1.736 |
| MHCII_jason_reseq | -1.809 | -2.1 |
| Isoniazid02 | 0.141 | -0.856 |
| Rifampicin4 | 1.17 | -0.436 |
| Ethambutol3 | 0.333 | -1.052 |
| Meropenem3 | 0.488 | -0.55 |
| Vancomycin16 | 0.499 | 0.013 |
| Rv2680_day32 | -1.282 | 0.038 |
| H37Rv_KO_MarP | -0.567 | 0.416 |
| hypoxia_3wks | -1.978 | -0.072 |
| hypoxia_6wks | -0.217 | -1.194 |
| glycerol | -0.157 | 0.148 |
| cholesterol | -0.509 | -0.331 |
| AJ | 0.471 | 1.151 |
| Bibs02 | -0.642 | -2.375 |
| Bibs02c | 3.812 | -0.534 |
| BL6 | 4.189 | 0.932 |
| BL6a | 3.734 | 1.036 |
| BXD01 | 2.879 | 1.005 |
| BXD010 | 2.52 | 0.766 |
| BXD011 | 3.56 | 0.785 |
| BXD03 | 2.371 | 1.371 |
| BXD04 | 1.221 | -0.082 |
| BXD05 | 4.371 | 0.39 |
| BXD06 | 2.466 | 0.93 |
| BXD07 | 2.957 | 1.317 |
| BXD08 | 1.622 | 1.423 |
| BXD09 | 3.392 | 1.202 |
| CAST | -0.179 | 0.389 |
| CCcont | 2.533 | 1.191 |
| DS01 | 0.479 | -0.736 |
| DS02 | 1.493 | 0.326 |
| DS04 | 0.62 | 0.103 |
| DS0c | 3.804 | -0.553 |
| GP01 | 1.109 | 0.477 |
| GP02 | 2.859 | 1.328 |
| GP0c | 4.362 | 1.587 |
| NOD | -0.174 | 0.208 |
| NZO | 2.852 | 1.017 |
| PWK | -0.315 | 0.0 |
| H37Rv_KO_CtpC | -0.261 | 1.865 |
| H37Rv_KO_CtpD | -0.445 | 0.924 |
| H37Rv_KO_Rv1272 | 2.605 | 0.869 |
| H37Rv_KO_SugABC | -0.159 | 0.657 |
| H37Rv_KO_MbtN | -0.26 | 1.416 |
| Trans05 | 1.171 | 1.462 |
| macrophage_unactivated | 0.189 | 0.615 |
| IL1 | 0.11 | -0.394 |
| Rapamycin | 0.568 | 0.246 |
| Tcell | 0.567 | -0.355 |
| GMCSF | 1.402 | 0.116 |
| IFNab | 0.877 | 0.747 |
| IFNg | 0.984 | 0.158 |
| IFNg_GMCSF1 | 0.336 | -0.575 |
| Rv1432_day32 | 0.0 | -0.022 |
| Rv1565c_day32 | 0.0 | 0.379 |
| secA2_input | 1.191 | 0.063 |
| delta_Rv3594 | -0.696 | 0.102 |
| delta_Rv3717 | 0.583 | -0.072 |
| delta_Rv3811 | -2.602 | -1.029 |
| delta_Rv0954 | -1.243 | -0.662 |
| PonA1 | 1.973 | -0.19 |
| EccD1_KO | 0.0 | -0.26 |
| EspI_KO | -1.452 | 0.334 |
| PE35_KO | 1.963 | -0.193 |
| PPE68_KO | 0.902 | -0.522 |
| glycerol2 | -0.708 | -0.446 |
| lignocerate | -1.299 | -0.409 |
| oleate | -2.657 | -0.489 |
| phosphatidylcholine | -0.297 | -0.598 |
| acetate | -0.17 | -0.218 |
| glucAc | 0.033 | -0.234 |
| Rv0950ko | 0.941 | 0.724 |
| Rv1096ko | 0.941 | 0.368 |
| Rv3684ko | -1.307 | 0.0 |
| delta_otsA_trehalose | 0.0 | -0.84 |