Top 10 genes with highest correlation to Rv1558/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3633/- | (cc=0.5149) | info on Rv3633/- |
| Rv2972c/- | (cc=0.4966) | info on Rv2972c/- |
| Rv0726c/- | (cc=0.439) | info on Rv0726c/- |
| Rv3312A/- | (cc=0.4323) | info on Rv3312A/- |
| Rv3451/cut3 | (cc=0.4274) | info on Rv3451/cut3 |
| Rv1719/- | (cc=0.3898) | info on Rv1719/- |
| Rv3826/fadD23 | (cc=0.3817) | info on Rv3826/fadD23 |
| Rv0873/fadE10 | (cc=0.3783) | info on Rv0873/fadE10 |
| Rv0530/- | (cc=0.3752) | info on Rv0530/- |
| Rv2459/- | (cc=0.373) | info on Rv2459/- |
Correlation of Rv1558/- with Rv3826/fadD23
Normalized LFCs for Rv1558/-:
(description and provenance of datasets)
| Rv1558/- | Rv3826/fadD23 | |
| Fe_supp_jason_reseq | 0.248 | 0.117 |
| low_pH_jason_reseq | -1.022 | 0.355 |
| NO_jason_reseq | 0.058 | -0.068 |
| B6_jason_reseq | 0.883 | 0.396 |
| MHCII_jason_reseq | 1.104 | 0.289 |
| Isoniazid02 | -0.687 | -0.093 |
| Rifampicin4 | 0.682 | 1.124 |
| Ethambutol3 | -0.305 | 0.927 |
| Meropenem3 | 1.242 | 0.049 |
| Vancomycin16 | -0.159 | 0.613 |
| Rv2680_day32 | 0.042 | 0.9 |
| H37Rv_KO_MarP | 0.144 | 0.526 |
| hypoxia_3wks | -0.287 | -0.435 |
| hypoxia_6wks | -0.507 | -0.474 |
| glycerol | -0.503 | -0.159 |
| cholesterol | -0.504 | -0.641 |
| AJ | 0.462 | -0.281 |
| Bibs02 | 0.487 | -0.608 |
| Bibs02c | 0.649 | -0.08 |
| BL6 | -0.091 | 0.6 |
| BL6a | 0.317 | 0.145 |
| BXD01 | -0.044 | -0.274 |
| BXD010 | 0.523 | -0.495 |
| BXD011 | 0.149 | 0.071 |
| BXD03 | 0.256 | 0.215 |
| BXD04 | 0.326 | 0.5 |
| BXD05 | -0.067 | -0.558 |
| BXD06 | 0.24 | 0.395 |
| BXD07 | 0.107 | -0.138 |
| BXD08 | 0.218 | -0.375 |
| BXD09 | 0.189 | -0.14 |
| CAST | 0.023 | 0.903 |
| CCcont | -0.421 | -0.212 |
| DS01 | 0.645 | -0.785 |
| DS02 | 0.501 | -1.23 |
| DS04 | 0.479 | -0.804 |
| DS0c | 1.358 | 0.159 |
| GP01 | 0.343 | -0.66 |
| GP02 | 0.554 | -0.587 |
| GP0c | -0.201 | -0.502 |
| NOD | -0.436 | 0.319 |
| NZO | 0.462 | 0.754 |
| PWK | 0.311 | 1.009 |
| H37Rv_KO_CtpC | 0.312 | 0.739 |
| H37Rv_KO_CtpD | 0.568 | 1.446 |
| H37Rv_KO_Rv1272 | -1.188 | 0.079 |
| H37Rv_KO_SugABC | -1.189 | -0.627 |
| H37Rv_KO_MbtN | 0.35 | -0.081 |
| Trans05 | -0.949 | 0.405 |
| macrophage_unactivated | 0.098 | 0.092 |
| IL1 | 0.409 | -0.658 |
| Rapamycin | 0.543 | -0.476 |
| Tcell | 0.186 | 0.0 |
| GMCSF | 0.399 | -0.158 |
| IFNab | -0.269 | -0.777 |
| IFNg | 0.123 | -0.329 |
| IFNg_GMCSF1 | 0.135 | -0.094 |
| Rv1432_day32 | -0.623 | -0.375 |
| Rv1565c_day32 | -3.116 | -3.976 |
| secA2_input | -0.122 | -1.226 |
| delta_Rv3594 | -0.099 | -0.558 |
| delta_Rv3717 | -0.186 | -1.357 |
| delta_Rv3811 | -0.335 | -0.694 |
| delta_Rv0954 | 0.647 | -0.35 |
| PonA1 | 0.9 | -0.044 |
| EccD1_KO | -0.585 | -0.437 |
| EspI_KO | 0.348 | 0.177 |
| PE35_KO | 0.292 | -0.125 |
| PPE68_KO | 0.87 | -0.208 |
| glycerol2 | 0.397 | -1.108 |
| lignocerate | 0.385 | -0.561 |
| oleate | 0.72 | -0.72 |
| phosphatidylcholine | 0.469 | -1.821 |
| acetate | -0.336 | -0.095 |
| glucAc | 0.241 | -0.383 |
| Rv0950ko | 0.552 | 0.537 |
| Rv1096ko | -0.181 | -0.778 |
| Rv3684ko | 0.095 | -1.035 |
| delta_otsA_trehalose | 1.305 | 0.147 |