TnSeqCorr

Top 10 genes with highest correlation to Rv1538c/ansA:

update plotcorrelationlink to info on gene
Rv0391/metZ (cc=0.6845) info on Rv0391/metZ
Rv0815c/cysA2 (cc=0.6095) info on Rv0815c/cysA2
Rv1590/- (cc=0.603) info on Rv1590/-
Rv3535c/hsaG (cc=0.6023) info on Rv3535c/hsaG
Rv1568/bioA (cc=0.6015) info on Rv1568/bioA
Rv0390/- (cc=0.5814) info on Rv0390/-
Rv3495c/lprN (cc=0.5747) info on Rv3495c/lprN
Rv3500c/yrbE4B (cc=0.5665) info on Rv3500c/yrbE4B
Rv0485/- (cc=0.5643) info on Rv0485/-
Rv3117/cysA3 (cc=0.5622) info on Rv3117/cysA3

Correlation of Rv1538c/ansA with Rv1590/-

Normalized LFCs for Rv1538c/ansA:
(description and provenance of datasets)
Rv1538c/ansARv1590/-
Fe_supp_jason_reseq

-0.957

1.809

low_pH_jason_reseq

-1.168

-2.058

NO_jason_reseq

0.032

-0.391

B6_jason_reseq

-3.362

-5.114

MHCII_jason_reseq

-2.132

-4.029

Isoniazid02

-1.713

-0.288

Rifampicin4

-0.376

-0.273

Ethambutol3

1.36

0.114

Meropenem3

-0.527

0.156

Vancomycin16

-1.048

0.462

Rv2680_day32

-2.826

-4.076

H37Rv_KO_MarP

0.563

-0.391

hypoxia_3wks

-2.265

0.598

hypoxia_6wks

-3.168

-0.18

glycerol

-6.0

-6.0

cholesterol

-4.849

-4.706

AJ

-1.249

-6.0

Bibs02

-0.629

-5.941

Bibs02c

-2.035

-6.0

BL6

-2.408

-3.094

BL6a

-2.175

-5.463

BXD01

-2.777

-3.774

BXD010

-1.114

-4.161

BXD011

-1.772

-3.691

BXD03

-1.642

-4.393

BXD04

-1.484

-4.018

BXD05

-2.133

-3.329

BXD06

-2.195

-4.337

BXD07

-2.365

-4.499

BXD08

-1.893

-4.321

BXD09

-2.024

-4.566

CAST

-1.445

-5.586

CCcont

-0.741

0.202

DS01

-2.324

-6.0

DS02

-1.314

-6.0

DS04

-3.49

-3.596

DS0c

-2.305

-6.0

GP01

-1.708

-2.937

GP02

-2.324

-2.475

GP0c

-2.138

-1.317

NOD

-1.131

-4.357

NZO

-1.962

-6.0

PWK

-1.027

-5.836

H37Rv_KO_CtpC

-1.824

-4.101

H37Rv_KO_CtpD

-1.331

-1.658

H37Rv_KO_Rv1272

-2.605

-4.196

H37Rv_KO_SugABC

-1.394

-1.708

H37Rv_KO_MbtN

-1.451

0.152

Trans05

-2.35

-3.603

macrophage_unactivated

-1.424

0.145

IL1

-1.444

-0.442

Rapamycin

-1.203

2.243

Tcell

0.593

0.241

GMCSF

-1.885

0.723

IFNab

-1.944

1.36

IFNg

-1.831

-0.657

IFNg_GMCSF1

-1.125

-2.209

Rv1432_day32

-2.924

-6.0

Rv1565c_day32

-2.281

-6.0

secA2_input

1.058

-0.088

delta_Rv3594

0.389

1.781

delta_Rv3717

-0.283

1.747

delta_Rv3811

0.4

0.921

delta_Rv0954

1.304

0.376

PonA1

0.906

1.032

EccD1_KO

-0.76

-1.312

EspI_KO

-1.32

-0.556

PE35_KO

-0.12

-0.621

PPE68_KO

-0.371

-1.145

glycerol2

0.161

0.0

lignocerate

-0.32

0.168

oleate

-0.373

0.0

phosphatidylcholine

-0.368

0.0

acetate

-0.437

0.0

glucAc

-0.272

1.034

Rv0950ko

0.374

-0.651

Rv1096ko

0.757

1.113

Rv3684ko

0.619

-0.17

delta_otsA_trehalose

-0.694

1.762