Top 10 genes with highest correlation to Rv1480/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2848c/cobB | (cc=0.5831) | info on Rv2848c/cobB |
| Rv0401/- | (cc=0.5411) | info on Rv0401/- |
| Rv1442/bisC | (cc=0.482) | info on Rv1442/bisC |
| Rv0756c/- | (cc=0.4569) | info on Rv0756c/- |
| Rv1446c/opcA | (cc=0.4544) | info on Rv1446c/opcA |
| Rv0383c/- | (cc=0.4468) | info on Rv0383c/- |
| Rv1459c/- | (cc=0.4451) | info on Rv1459c/- |
| Rv0015c/pknA | (cc=0.4445) | info on Rv0015c/pknA |
| Rv2822c/- | (cc=0.4429) | info on Rv2822c/- |
| Rv3450c/eccB4 | (cc=0.4277) | info on Rv3450c/eccB4 |
Correlation of Rv1480/- with Rv2848c/cobB
Normalized LFCs for Rv1480/-:
(description and provenance of datasets)
| Rv1480/- | Rv2848c/cobB | |
| Fe_supp_jason_reseq | -0.189 | 0.66 |
| low_pH_jason_reseq | -0.93 | -0.212 |
| NO_jason_reseq | -2.94 | 0.071 |
| B6_jason_reseq | -1.927 | 0.274 |
| MHCII_jason_reseq | -0.503 | 0.558 |
| Isoniazid02 | 1.924 | 1.521 |
| Rifampicin4 | 0.712 | 0.72 |
| Ethambutol3 | 0.32 | 1.454 |
| Meropenem3 | 0.454 | 0.187 |
| Vancomycin16 | 1.287 | 0.706 |
| Rv2680_day32 | 0.578 | -0.633 |
| H37Rv_KO_MarP | -1.161 | -0.161 |
| hypoxia_3wks | -0.678 | 0.263 |
| hypoxia_6wks | -0.904 | -0.035 |
| glycerol | 2.319 | 0.426 |
| cholesterol | 0.24 | 0.385 |
| AJ | -0.671 | 0.521 |
| Bibs02 | 0.923 | 0.534 |
| Bibs02c | 0.347 | 0.303 |
| BL6 | -0.699 | 0.39 |
| BL6a | -0.573 | -0.034 |
| BXD01 | -1.449 | -0.805 |
| BXD010 | -1.425 | -1.385 |
| BXD011 | -1.175 | -0.787 |
| BXD03 | -1.03 | -0.372 |
| BXD04 | -1.376 | -0.708 |
| BXD05 | -1.497 | -0.832 |
| BXD06 | -1.231 | -0.705 |
| BXD07 | -1.054 | -1.089 |
| BXD08 | -0.916 | -0.251 |
| BXD09 | -1.07 | -1.055 |
| CAST | -0.357 | 0.02 |
| CCcont | 0.154 | -0.497 |
| DS01 | -1.177 | 0.58 |
| DS02 | 0.077 | 0.799 |
| DS04 | -1.477 | 0.748 |
| DS0c | -1.494 | 0.487 |
| GP01 | -0.91 | -0.741 |
| GP02 | -0.465 | -0.257 |
| GP0c | -0.808 | -0.167 |
| NOD | -0.257 | -0.334 |
| NZO | -1.374 | 0.212 |
| PWK | -1.988 | 0.342 |
| H37Rv_KO_CtpC | -1.498 | -0.324 |
| H37Rv_KO_CtpD | -1.409 | -0.067 |
| H37Rv_KO_Rv1272 | -1.569 | -0.372 |
| H37Rv_KO_SugABC | -0.831 | -1.675 |
| H37Rv_KO_MbtN | 0.835 | -1.399 |
| Trans05 | -1.454 | -0.419 |
| macrophage_unactivated | 1.474 | 2.071 |
| IL1 | 0.801 | 2.948 |
| Rapamycin | 1.04 | 2.627 |
| Tcell | -1.639 | -4.822 |
| GMCSF | 0.713 | 2.986 |
| IFNab | 2.476 | 3.223 |
| IFNg | 1.486 | 2.881 |
| IFNg_GMCSF1 | 4.258 | 4.342 |
| Rv1432_day32 | 0.0 | -0.257 |
| Rv1565c_day32 | 0.0 | 0.134 |
| secA2_input | 0.56 | 1.061 |
| delta_Rv3594 | -1.077 | -0.199 |
| delta_Rv3717 | -1.57 | -0.273 |
| delta_Rv3811 | -0.46 | -1.05 |
| delta_Rv0954 | -1.018 | -0.696 |
| PonA1 | -2.461 | 0.17 |
| EccD1_KO | -4.019 | -0.122 |
| EspI_KO | -2.133 | 0.103 |
| PE35_KO | -1.706 | 0.863 |
| PPE68_KO | -2.393 | 0.39 |
| glycerol2 | 0.0 | 0.475 |
| lignocerate | 0.32 | 0.66 |
| oleate | 0.0 | 0.2 |
| phosphatidylcholine | 0.193 | 0.675 |
| acetate | 1.662 | 1.714 |
| glucAc | 1.034 | 0.59 |
| Rv0950ko | 0.347 | -0.199 |
| Rv1096ko | 0.347 | 0.507 |
| Rv3684ko | 0.0 | -1.068 |
| delta_otsA_trehalose | 0.0 | 0.322 |