Top 10 genes with highest correlation to Rv1474c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2621c/- | (cc=0.4614) | info on Rv2621c/- |
| Rv1069c/- | (cc=0.4602) | info on Rv1069c/- |
| Rv3075c/- | (cc=0.4515) | info on Rv3075c/- |
| Rv2668/- | (cc=0.4503) | info on Rv2668/- |
| Rv3160c/- | (cc=0.4454) | info on Rv3160c/- |
| Rv2141c/- | (cc=0.4311) | info on Rv2141c/- |
| Rv1193/fadD36 | (cc=0.4289) | info on Rv1193/fadD36 |
| Rv2680/- | (cc=0.4203) | info on Rv2680/- |
| Rv3385c/vapB46 | (cc=0.4134) | info on Rv3385c/vapB46 |
| Rv3848/- | (cc=0.4098) | info on Rv3848/- |
Correlation of Rv1474c/- with Rv3385c/vapB46
Normalized LFCs for Rv1474c/-:
(description and provenance of datasets)
| Rv1474c/- | Rv3385c/vapB46 | |
| Fe_supp_jason_reseq | -0.617 | 1.566 |
| low_pH_jason_reseq | 0.579 | -0.937 |
| NO_jason_reseq | -2.318 | -1.67 |
| B6_jason_reseq | -0.813 | 0.704 |
| MHCII_jason_reseq | -1.359 | 0.224 |
| Isoniazid02 | 1.551 | -0.041 |
| Rifampicin4 | 1.649 | 0.872 |
| Ethambutol3 | 2.526 | 1.43 |
| Meropenem3 | 0.32 | 0.174 |
| Vancomycin16 | 0.626 | 0.072 |
| Rv2680_day32 | 1.115 | -0.772 |
| H37Rv_KO_MarP | 0.117 | -0.976 |
| hypoxia_3wks | -1.132 | -0.67 |
| hypoxia_6wks | -0.94 | -2.965 |
| glycerol | -1.207 | 0.266 |
| cholesterol | -1.436 | -0.813 |
| AJ | -1.457 | -0.916 |
| Bibs02 | -0.886 | -1.027 |
| Bibs02c | 0.0 | 0.255 |
| BL6 | 1.422 | 0.506 |
| BL6a | -0.324 | 0.512 |
| BXD01 | -0.292 | 0.547 |
| BXD010 | -1.449 | -2.575 |
| BXD011 | -0.313 | -0.64 |
| BXD03 | -0.046 | -0.581 |
| BXD04 | 0.138 | -1.866 |
| BXD05 | -0.483 | -0.991 |
| BXD06 | 0.108 | -0.982 |
| BXD07 | -0.283 | -0.777 |
| BXD08 | -0.509 | 0.162 |
| BXD09 | -0.538 | -0.439 |
| CAST | -0.938 | -0.227 |
| CCcont | 0.492 | 0.662 |
| DS01 | -0.482 | 0.5 |
| DS02 | 0.521 | 0.377 |
| DS04 | -1.102 | -0.486 |
| DS0c | 0.339 | 1.813 |
| GP01 | -1.694 | -2.068 |
| GP02 | -0.825 | -1.901 |
| GP0c | -1.348 | 0.635 |
| NOD | 0.384 | -1.549 |
| NZO | -2.257 | -2.487 |
| PWK | -0.656 | -0.986 |
| H37Rv_KO_CtpC | 1.511 | 0.562 |
| H37Rv_KO_CtpD | 0.565 | 0.903 |
| H37Rv_KO_Rv1272 | 0.32 | -0.737 |
| H37Rv_KO_SugABC | 0.277 | -1.546 |
| H37Rv_KO_MbtN | -1.022 | 0.104 |
| Trans05 | 0.166 | -0.146 |
| macrophage_unactivated | -0.363 | 0.281 |
| IL1 | -0.169 | -1.789 |
| Rapamycin | 0.166 | -1.369 |
| Tcell | 1.215 | 0.717 |
| GMCSF | -1.196 | -0.198 |
| IFNab | -1.218 | -1.128 |
| IFNg | -2.037 | -0.935 |
| IFNg_GMCSF1 | -2.394 | -2.259 |
| Rv1432_day32 | -1.713 | -0.18 |
| Rv1565c_day32 | 0.03 | -0.016 |
| secA2_input | 0.308 | 2.686 |
| delta_Rv3594 | -0.32 | -1.054 |
| delta_Rv3717 | -1.083 | -0.653 |
| delta_Rv3811 | -0.485 | 0.266 |
| delta_Rv0954 | 0.255 | -1.73 |
| PonA1 | 0.681 | 0.688 |
| EccD1_KO | -0.96 | -2.384 |
| EspI_KO | -0.975 | -0.787 |
| PE35_KO | -0.674 | -0.755 |
| PPE68_KO | -1.014 | -1.366 |
| glycerol2 | -0.146 | 1.337 |
| lignocerate | -0.885 | 1.99 |
| oleate | -0.664 | -2.521 |
| phosphatidylcholine | -0.629 | 1.601 |
| acetate | 0.023 | 2.075 |
| glucAc | -0.347 | 2.25 |
| Rv0950ko | 1.273 | 0.289 |
| Rv1096ko | 0.166 | -0.419 |
| Rv3684ko | 0.092 | 2.535 |
| delta_otsA_trehalose | 0.711 | 2.214 |